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    sto-5 Band 7 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181730, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sto-5
    Official Full Name
    Band 7 domain-containing protein
    Primary source
    WormBase:WBGene00006067
    Locus tag
    CELE_F41G4.3
    See related
    AllianceGenome:WB:WBGene00006067
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in FLPL and FLPR. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sto-5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Sequence:
    Chromosome: X; NC_003284.9 (16816260..16825458, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Adenylyl cyclase-associated protein;C-CAP/cofactor C-like domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene CCHC-type domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The nematode C. elegans senses airborne sound. Iliff AJ, et al. Neuron, 2021 Nov 17. PMID 34555314, Free PMC Article
    2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Band 7 domain-containing protein
    NP_001355390.1
    • Confirmed by transcript evidence
    NP_001355544.1
    • Confirmed by transcript evidence
    NP_001379951.1
    • Confirmed by transcript evidence
    NP_001379952.1
    • Confirmed by transcript evidence
    NP_001380245.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      16816260..16825458 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001368561.3 → NP_001355390.1  Band 7 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2L024
      Conserved Domains (1) summary
      cl19107
      Location:115 → 316
      SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    2. NM_001392911.1 → NP_001379951.1  Band 7 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YZV7
      Conserved Domains (1) summary
      cl19107
      Location:87 → 288
      SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    3. NM_001392912.1 → NP_001379952.1  Band 7 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YZV6
      Conserved Domains (1) summary
      cl19107
      Location:167 → 368
      SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    4. NM_001392914.1 → NP_001380245.1  Band 7 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A3P6MYB5
      Conserved Domains (1) summary
      cl19107
      Location:69 → 270
      SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

    5. NM_001368563.4 → NP_001355544.1  Band 7 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A3P6N6M6
      Conserved Domains (1) summary
      cl19107
      Location:89 → 290
      SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    Nucleotide Protein
    Heading Accession and Version

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