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    C25E10.12 UPF0046 protein C25E10.12 [ Caenorhabditis elegans ]

    Gene ID: 182896, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C25E10.12
    Official Full Name
    UPF0046 protein C25E10.12
    Primary source
    WormBase:WBGene00016101
    Locus tag
    CELE_C25E10.12
    See related
    AllianceGenome:WB:WBGene00016101
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable hydrolase activity. Is expressed in arcade cell; hypodermis; intestine; and nervous system. Orthologous to human MPPED1 (metallophosphoesterase domain containing 1) and MPPED2 (metallophosphoesterase domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C25E10.12 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (9060475..9062441, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene TIL domain-containing protein Neighboring gene INSulin related Neighboring gene Prohormone-3 Neighboring gene Secreted protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    UPF0046 protein C25E10.12
    NP_505349.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9060475..9062441 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072948.5 → NP_505349.1  UPF0046 protein C25E10.12 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505349.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q18161
      Conserved Domains (2) summary
      cd07379
      Location:47 → 255
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain
      pfam00149
      Location:47 → 239
      Metallophos; Calcineurin-like phosphoesterase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q18161.1

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