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    arle-14 ARF7 effector protein C-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175790, updated on 9-Dec-2024

    Summary

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    Official Symbol
    arle-14
    Official Full Name
    ARF7 effector protein C-terminal domain-containing protein
    Primary source
    WormBase:WBGene00015145
    Locus tag
    CELE_B0336.5
    See related
    AllianceGenome:WB:WBGene00015145
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human ARL14EP (ADP ribosylation factor like GTPase 14 effector protein) and ARL14EPL (ADP ribosylation factor like GTPase 14 effector protein like). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See arle-14 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (5692906..5693938)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Adenosine 3'-phospho 5'-phosphosulfate transporter 2 Neighboring gene Calcipressin-like protein Neighboring gene SH3 domain-containing protein Neighboring gene Transcription initiation factor IIA small chain homolog Neighboring gene THAP-type domain-containing protein Neighboring gene Ubiquitin-like protein atg-12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Regulated nuclear accumulation of a histone methyltransferase times the onset of heterochromatin formation in C. elegans embryos. Mutlu B, et al. Sci Adv, 2018 Aug. PMID 30140741, Free PMC Article
    2. Heterochromatic foci and transcriptional repression by an unstructured MET-2/SETDB1 co-factor LIN-65. Delaney CE, et al. J Cell Biol, 2019 Mar 4. PMID 30737265, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    ARF7 effector protein C-terminal domain-containing protein
    NP_001033343.1
    • Confirmed by transcript evidence
    NP_001033344.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      5692906..5693938
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001038254.6 → NP_001033343.1  ARF7 effector protein C-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001033343.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17483
      Conserved Domains (1) summary
      pfam14949
      Location:70 → 178
      ARF7EP_C; ARF7 effector protein C-terminus

    2. NM_001038255.8 → NP_001033344.1  ARF7 effector protein C-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001033344.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KY75
      Conserved Domains (1) summary
      pfam14949
      Location:73 → 181
      ARF7EP_C; ARF7 effector protein C-terminus
    Nucleotide Protein
    Heading Accession and Version

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