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    ZK993.2 C2H2-type domain-containing protein;RING-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 191481, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ZK993.2
    Official Full Name
    C2H2-type domain-containing protein;RING-type domain-containing protein
    Primary source
    WormBase:WBGene00022838
    Locus tag
    CELE_ZK993.2
    See related
    AllianceGenome:WB:WBGene00022838
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ZK993.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (1107578..1112303)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Autophagy-related protein 9;RGS domain-containing protein Neighboring gene Protein kinase domain-containing protein Neighboring gene ncRNA Neighboring gene RING-type domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    C2H2-type domain-containing protein;RING-type domain-containing protein
    NP_001293200.1
    • Confirmed by transcript evidence
    NP_001293201.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      1107578..1112303
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001306271.2 → NP_001293200.1  RING-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293200.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CK65
      Conserved Domains (2) summary
      COG1196
      Location:192 → 444
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cl17238
      Location:9 → 39
      RING_Ubox; RING finger (Really Interesting New Gene) domain and U-box domain superfamily

    2. NM_001306272.3 → NP_001293201.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293201.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLJ8
      Conserved Domains (1) summary
      COG1196
      Location:129 → 381
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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