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    glb-22 GLOBIN domain-containing protein;Globin family profile domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187832, updated on 9-Dec-2024

    Summary

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    Official Symbol
    glb-22
    Official Full Name
    GLOBIN domain-containing protein;Globin family profile domain-containing protein
    Primary source
    WormBase:WBGene00011251
    Locus tag
    CELE_R11H6.3
    See related
    AllianceGenome:WB:WBGene00011251
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable heme binding activity and oxygen binding activity. Is expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See glb-22 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (14600272..14606538)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Peptidase M20 dimerization domain-containing protein Neighboring gene Serine incorporator Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene PEST proteolytic signal-containing nuclear protein;Shugoshin_C domain-containing protein;Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Caenorhabditis globin gene family reveals extensive nematode-specific radiation and diversification. Hoogewijs D, et al. BMC Evol Biol, 2008 Oct 9. PMID 18844991, Free PMC Article
    2. Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family. Hoogewijs D, et al. BMC Genomics, 2007 Oct 4. PMID 17916248, Free PMC Article
    3. Distinct patterns of gene and protein expression elicited by organophosphorus pesticides in Caenorhabditis elegans. Lewis JA, et al. BMC Genomics, 2009 Apr 29. PMID 19402892, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    GLOBIN domain-containing protein;Globin family profile domain-containing protein
    NP_001256600.1
    • Partially confirmed by transcript evidence
    NP_001256601.1
    • Confirmed by transcript evidence
    NP_001256602.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      14600272..14606538
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269671.3 → NP_001256600.1  GLOBIN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256600.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G343
      Conserved Domains (1) summary
      cd01040
      Location:86 → 237
      Mb_like; myoglobin_like; M family globin domain

    2. NM_001269672.3 → NP_001256601.1  GLOBIN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256601.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G345
      Conserved Domains (1) summary
      cd01040
      Location:79 → 230
      Mb_like; myoglobin_like; M family globin domain

    3. NM_001269673.4 → NP_001256602.1  Globin family profile domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256602.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G344
      Conserved Domains (1) summary
      cd01040
      Location:79 → 226
      Mb_like; myoglobin_like; M family globin domain
    Nucleotide Protein
    Heading Accession and Version

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