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    lpr-2 LiPocalin-Related protein [ Caenorhabditis elegans ]

    Gene ID: 178111, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lpr-2
    Official Full Name
    LiPocalin-Related protein
    Primary source
    WormBase:WBGene00011726
    Locus tag
    CELE_T12A7.5
    See related
    AllianceGenome:WB:WBGene00011726
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable retinoid binding activity and retinol transmembrane transporter activity. Predicted to be involved in lipid transport. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lpr-2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    20
    Sequence:
    Chromosome: IV; NC_003282.8 (11779216..11786975)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene EGF-like domain-containing protein Neighboring gene Lipase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Activin_recp domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Lipocalin signaling controls unicellular tube development in the Caenorhabditis elegans excretory system. Stone CE, et al. Dev Biol, 2009 May 15. PMID 19269285, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables retinoid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables retinol transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in retinol transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LiPocalin-Related protein
    NP_502231.1
    • Product from WormBase gene class lpr;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      11779216..11786975
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069830.5 → NP_502231.1  LiPocalin-Related protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502231.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EEB8
    Nucleotide Protein
    Heading Accession and Version

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