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    • Showing Current items.

    ZK593.3 High-affinity choline transporter 1-like [ Caenorhabditis elegans ]

    Gene ID: 191355, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ZK593.3
    Official Full Name
    High-affinity choline transporter 1-like
    Primary source
    WormBase:WBGene00014003
    Locus tag
    CELE_ZK593.3
    See related
    AllianceGenome:WB:WBGene00014003
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ZK593.3 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (10916593..10917718)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Pyruvate kinase Neighboring gene TransThyretin-Related family domain;Transposase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Lysine-specific demethylase rbr-2;[histone H3]-trimethyl-L-lysine(4) demethylase Neighboring gene Dynactin subunit 1;Dynein associated protein domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    High-affinity choline transporter 1-like
    NP_502031.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10916593..10917718
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069630.4 → NP_502031.1  High-affinity choline transporter 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502031.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q23537
    Nucleotide Protein
    Heading Accession and Version

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