U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ver-3 Tyrosine-protein kinase receptor ver-3 [ Caenorhabditis elegans ]

    Gene ID: 181289, updated on 9-Dec-2024

    Summary

    Official Symbol
    ver-3
    Official Full Name
    Tyrosine-protein kinase receptor ver-3
    Primary source
    WormBase:WBGene00006896
    Locus tag
    CELE_F59F3.1
    See related
    AllianceGenome:WB:WBGene00006896
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable transmembrane receptor protein tyrosine kinase activity. Involved in nematode male tail tip morphogenesis. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Is expressed in ALA; anal sphincter muscle; and pharyngeal muscle cell. Human ortholog(s) of this gene implicated in Kuhnt-Junius degeneration; bronchopulmonary dysplasia; diabetic retinopathy; and pre-eclampsia. Orthologous to human FLT1 (fms related receptor tyrosine kinase 1). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ver-3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    14
    Sequence:
    Chromosome: X; NC_003284.9 (10992477..10997851)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Tyrosine-protein kinase receptor ver-4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Potassium channel tetramerization-type BTB domain-containing protein Neighboring gene Col_cuticle_N domain-containing protein Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transmembrane receptor protein tyrosine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transmembrane receptor protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in multicellular organism development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nematode male tail tip morphogenesis IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Tyrosine-protein kinase receptor ver-3
    NP_509836.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      10992477..10997851
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077435.7NP_509836.1  Tyrosine-protein kinase receptor ver-3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509836.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q21038
      Conserved Domains (7) summary
      smart00408
      Location:692747
      IGc2; Immunoglobulin C-2 Type
      smart00221
      Location:8471163
      STYKc; Protein kinase; unclassified specificity
      smart00409
      Location:242313
      IG; Immunoglobulin
      smart00410
      Location:578667
      IG_like; Immunoglobulin like
      pfam07679
      Location:673757
      I-set; Immunoglobulin I-set domain
      cd00192
      Location:8511164
      PTKc; Catalytic domain of Protein Tyrosine Kinases
      pfam13927
      Location:578654
      Ig_3; Immunoglobulin domain