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    mics-1 Mitochondrial scaffolding protein 1;PDZ domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179475, updated on 9-Dec-2024

    Summary

    Official Symbol
    mics-1
    Official Full Name
    Mitochondrial scaffolding protein 1;PDZ domain-containing protein
    Primary source
    WormBase:WBGene00011890
    Locus tag
    CELE_T21C9.1
    See related
    AllianceGenome:WB:WBGene00011890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human SYNJ2BP (synaptojanin 2 binding protein). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See mics-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (10576510..10578326, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Vacuolar protein sorting-associated protein 54 Neighboring gene ncRNA Neighboring gene Amiloride-sensitive sodium channel Neighboring gene Enhancer of rudimentary homolog Neighboring gene LiPid Depleted

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    Mitochondrial scaffolding protein 1;PDZ domain-containing protein
    NP_001343863.1
    • Partially confirmed by transcript evidence
    NP_505712.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      10576510..10578326 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356737.2NP_001343863.1  PDZ domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2C9C3M8
      Conserved Domains (1) summary
      cd00992
      Location:71145
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    2. NM_073311.3NP_505712.1  Mitochondrial scaffolding protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505712.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q22638
      Conserved Domains (1) summary
      cd00992
      Location:47121
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...