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    C09E9.1 30S ribosomal protein S15;DNA_pol_B_exo1 domain-containing protein;Transposase;Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 182452, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C09E9.1
    Official Full Name
    30S ribosomal protein S15;DNA_pol_B_exo1 domain-containing protein;Transposase;Uncharacterized protein
    Primary source
    WormBase:WBGene00007476
    Locus tag
    CELE_C09E9.1
    See related
    AllianceGenome:WB:WBGene00007476
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in regulation of mitochondrial membrane potential. Predicted to be located in ribosome. Predicted to be active in mitochondrion. Is expressed in several structures, including intestine; nervous system; non-striated muscle; pharynx; and tail. Orthologous to human TUSC2 (tumor suppressor 2, mitochondrial calcium regulator). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C09E9.1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (1274868..1277062)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CUB_2 domain-containing protein Neighboring gene C-type lectin domain-containing protein Neighboring gene Calponin-homology (CH) domain-containing protein Neighboring gene ATP-dependent RNA helicase;Pre-mRNA-processing ATP-dependent RNA helicase PRP5;RNA helicase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in regulation of mitochondrial membrane potential IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    30S ribosomal protein S15;DNA_pol_B_exo1 domain-containing protein;Transposase;Uncharacterized protein
    NP_001360251.1
    • Confirmed by transcript evidence
    NP_001368277.1
    • Confirmed by transcript evidence
    NP_001368278.1
    • Confirmed by transcript evidence
    NP_741315.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      1274868..1277062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001372708.2 → NP_001360251.1  30S ribosomal protein S15 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PBM6
      Conserved Domains (1) summary
      pfam15000
      Location:1 → 58
      TUSC2; tumor suppressor candidate 2

    2. NM_171266.6 → NP_741315.1  Uncharacterized protein CELE_C09E9.1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741315.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4F300, Q93196
      Conserved Domains (1) summary
      pfam15000
      Location:1 → 116
      TUSC2; Tumour suppressor candidate 2

    3. NM_001380039.1 → NP_001368277.1  DNA_pol_B_exo1 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PRQ9
      Conserved Domains (1) summary
      pfam15000
      Location:1 → 83
      TUSC2; tumor suppressor candidate 2

    4. NM_001380040.1 → NP_001368278.1  Transposase [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PEV1
      Conserved Domains (1) summary
      pfam15000
      Location:1 → 39
      TUSC2; tumor suppressor candidate 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93196.1

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