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    syx-4 Putative syntaxin-4 [ Caenorhabditis elegans ]

    Gene ID: 177647, updated on 9-Dec-2024

    Summary

    Official Symbol
    syx-4
    Official Full Name
    Putative syntaxin-4
    Primary source
    WormBase:WBGene00006374
    Locus tag
    CELE_T01B11.3
    See related
    AllianceGenome:WB:WBGene00006374
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable SNAP receptor activity and SNARE binding activity. Involved in cortical granule exocytosis; positive regulation of cytokinesis; and regulation of exocytosis. Located in cleavage furrow; cortical granule; and perinuclear region of cytoplasm. Is expressed in gonad and seam cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See syx-4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (8457280..8458933)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Ethanolamine-phosphate phospho-lyase homolog 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ADP/ATP translocase Neighboring gene MFS domain-containing protein;Major facilitator superfamily (MFS) profile domain-containing protein

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables SNAP receptor activity  
    enables SNARE binding  
    enables protein binding PubMed 
    Process Evidence Code Pubs
    involved_in cortical granule exocytosis PubMed 
    involved_in exocytosis  
    involved_in intracellular protein transport  
    involved_in neurotransmitter transport  
    involved_in positive regulation of cytokinesis PubMed 
    involved_in regulation of exocytosis PubMed 
    involved_in synaptic vesicle docking  
    involved_in vesicle docking  
    involved_in vesicle fusion  
    involved_in vesicle-mediated transport  
    Component Evidence Code Pubs
    part_of SNARE complex  
    located_in cleavage furrow PubMed 
    located_in cortical granule PubMed 
    is_active_in endomembrane system  
    located_in membrane  
    located_in perinuclear region of cytoplasm PubMed 
    is_active_in plasma membrane  
    located_in plasma membrane PubMed 

    General protein information

    Preferred Names
    Putative syntaxin-4
    NP_501439.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      8457280..8458933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069038.4NP_501439.2  Putative syntaxin-4 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501439.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P91409
      Conserved Domains (3) summary
      smart00503
      Location:31142
      SynN; Syntaxin N-terminal domain
      cd15848
      Location:194254
      SNARE_syntaxin1-like; SNARE motif of syntaxin 1 and related proteins
      pfam00804
      Location:33228
      Syntaxin; Syntaxin
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