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    rpl-30 Large ribosomal subunit protein eL30 [ Caenorhabditis elegans ]

    Gene ID: 172921, updated on 9-Dec-2024

    Summary

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    Official Symbol
    rpl-30
    Official Full Name
    Large ribosomal subunit protein eL30
    Primary source
    WormBase:WBGene00004444
    Locus tag
    CELE_Y106G6H.3
    See related
    AllianceGenome:WB:WBGene00004444
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Involved in determination of adult lifespan. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in herpes simplex. Orthologous to human RPL30 (ribosomal protein L30). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See rpl-30 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (10436254..10436884)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Polyadenylate-binding protein Neighboring gene MADF domain-containing protein Neighboring gene DAO domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of eight novel Caenorhabditis elegans small RNAs. Wachi M, et al. Gene, 2004 Jun 23. PMID 15194189
    2. An improved method for proteomics studies in C. elegans by fluorogenic derivatization, HPLC isolation, enzymatic digestion and liquid chromatography--tandem mass spectrometric identification. Masuda M, et al. Biomed Chromatogr, 2005 Sep. PMID 15654727
    3. Lifespan extension by conditions that inhibit translation in Caenorhabditis elegans. Hansen M, et al. Aging Cell, 2007 Feb. PMID 17266679
    4. A Sterile 20 Family Kinase and Its Co-factor CCM-3 Regulate Contractile Ring Proteins on Germline Intercellular Bridges. Rehain-Bell K, et al. Curr Biol, 2017 Mar 20. PMID 28285996, Free PMC Article
    5. RbAp46/48(LIN-53) Is Required for Holocentromere Assembly in Caenorhabditis elegans. Lee BC, et al. Cell Rep, 2016 Mar 1. PMID 26904949

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in determination of adult lifespan IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Large ribosomal subunit protein eL30
    NP_001380121.1
    • Confirmed by transcript evidence
    NP_492728.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      10436254..10436884
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392932.1 → NP_001380121.1  Large ribosomal subunit protein eL30 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      I2HAJ2
      Conserved Domains (1) summary
      PTZ00106
      Location:1 → 89
      PTZ00106; 60S ribosomal protein L30; Provisional

    2. NM_060327.8 → NP_492728.2  Large ribosomal subunit protein eL30 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492728.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWS4
      Conserved Domains (1) summary
      PTZ00106
      Location:4 → 110
      PTZ00106; 60S ribosomal protein L30; Provisional

    RNA

    1. NR_101614.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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