U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y116A8C.33 WSN domain-containing protein;protein of unknown function WSN domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178488, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y116A8C.33
    Official Full Name
    WSN domain-containing protein;protein of unknown function WSN domain-containing protein
    Primary source
    WormBase:WBGene00013809
    Locus tag
    CELE_Y116A8C.33
    See related
    AllianceGenome:WB:WBGene00013809
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in intestine. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y116A8C.33 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (17112113..17115466)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 Neighboring gene Branchpoint-bridging protein Neighboring gene Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase E Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RNA-binding protein;Splicing factor U2AF 35 kDa subunit Neighboring gene Intersectin-1;SH3 domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    General protein information

    Go to the top of the page Help
    Preferred Names
    WSN domain-containing protein;protein of unknown function WSN domain-containing protein
    NP_001299976.1
    • Confirmed by transcript evidence
    NP_503035.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      17112113..17115466
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070634.5 → NP_503035.1  protein of unknown function WSN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503035.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2S0
      Conserved Domains (3) summary
      TIGR01612
      Location:54 → 576
      235kDa-fam; reticulocyte binding/rhoptry protein
      cl12013
      Location:110 → 247
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl27447
      Location:36 → 96
      WSN; Domain of unknown function

    2. NM_001313047.3 → NP_001299976.1  WSN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AV48
      Conserved Domains (2) summary
      cl12013
      Location:49 → 186
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl15257
      Location:11 → 56
      GIY-YIG_SF; GIY-YIG nuclease domain superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools