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    srm-6 G_PROTEIN_RECEP_F1_2 domain-containing protein;Serpentine Receptor, class M [ Caenorhabditis elegans ]

    Gene ID: 179931, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srm-6
    Official Full Name
    G_PROTEIN_RECEP_F1_2 domain-containing protein;Serpentine Receptor, class M
    Primary source
    WormBase:WBGene00009810
    Locus tag
    CELE_F47B8.9
    See related
    AllianceGenome:WB:WBGene00009810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in amphid neurons; intestine; and retrovesicular ganglion. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srm-6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (14336955..14338808)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class M Neighboring gene Serpentine Receptor, class M Neighboring gene ncRNA Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Caenorhabditis elegans PUF protein family with distinct RNA binding specificity. Stumpf CR, et al. RNA, 2008 Aug. PMID 18579869, Free PMC Article
    2. The PUF Protein Family: Overview on PUF RNA Targets, Biological Functions, and Post Transcriptional Regulation. Wang M, et al. Int J Mol Sci, 2018 Jan 30. PMID 29385744, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    G_PROTEIN_RECEP_F1_2 domain-containing protein;Serpentine Receptor, class M
    NP_506555.2
    • Product from WormBase gene class srm;
      Confirmed by transcript evidence
    NP_872185.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      14336955..14338808
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074154.5 → NP_506555.2  Serpentine Receptor, class M [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506555.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20527
      Conserved Domains (1) summary
      cl22924
      Location:197 → 315
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

    2. NM_182385.4 → NP_872185.2  G_PROTEIN_RECEP_F1_2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_872185.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I4I5
    Nucleotide Protein
    Heading Accession and Version

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