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    • Showing Current items.

    sri-16 Serpentine Receptor, class I [ Caenorhabditis elegans ]

    Gene ID: 184551, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sri-16
    Official Full Name
    Serpentine Receptor, class I
    Primary source
    WormBase:WBGene00005528
    Locus tag
    CELE_F15H9.4
    See related
    AllianceGenome:WB:WBGene00005528
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sri-16 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    7
    Sequence:
    Chromosome: I; NC_003279.8 (12148080..12150741, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene tRNA-Met Neighboring gene Serpentine Receptor, class H Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class I Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class I
    NP_493071.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      12148080..12150741 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060670.2 → NP_493071.2  Serpentine Receptor, class I [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493071.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62177
      Conserved Domains (1) summary
      pfam10327
      Location:5 → 305
      7TM_GPCR_Sri; Serpentine type 7TM GPCR chemoreceptor Sri
    Nucleotide Protein
    Heading Accession and Version

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