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    ssp-35 MSP domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179681, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ssp-35
    Official Full Name
    MSP domain-containing protein
    Primary source
    WormBase:WBGene00010091
    Locus tag
    CELE_F55C5.1
    See related
    AllianceGenome:WB:WBGene00010091
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See ssp-35 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_003283.11 (12263500..12263823, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Putative UDP-glucuronosyltransferase ugt-56 Neighboring gene Tubulin beta chain Neighboring gene pseudo Neighboring gene Potassium channel domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gamma radiation induces life stage-dependent reprotoxicity in Caenorhabditis elegans via impairment of spermatogenesis. Maremonti E, et al. Sci Total Environ, 2019 Dec 10. PMID 31425988
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    MSP domain-containing protein
    NP_506076.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12263500..12263823 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073675.5 → NP_506076.1  MSP domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506076.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20815
      Conserved Domains (1) summary
      pfam00635
      Location:1 → 99
      Motile_Sperm; MSP (Major sperm protein) domain
    Nucleotide Protein
    Heading Accession and Version

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