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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163554.2 → NP_001157026.1 POU domain, class 2, transcription factor 2 isoform 4
See identical proteins and their annotated locations for NP_001157026.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) has an additional exon in the 3' coding region, as compared to variant 1. The resulting isoform (4) has a longer and different C-terminus, as compared to isoform 1.
- Source sequence(s)
-
AC120393
- Consensus CDS
-
CCDS52144.1
- UniProtKB/Swiss-Prot
-
Q00196
- Related
- ENSMUSP00000104056.4, ENSMUST00000108418.11
- Conserved Domains (2) summary
-
- smart00352
Location:179 → 253
- POU; Found in Pit-Oct-Unc transcription factors
- pfam00046
Location:284 → 337
- Homeobox; Homeobox domain
-
NM_001163555.2 → NP_001157027.1 POU domain, class 2, transcription factor 2 isoform 3
See identical proteins and their annotated locations for NP_001157027.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has an additional segment in the coding region, as compared to variant 1. The resulting isoform (3) is longer and has the same N- and C-termini, as compared to isoform 1.
- Source sequence(s)
-
AC120393
- Consensus CDS
-
CCDS52145.1
- UniProtKB/TrEMBL
-
H3BKB7
- Related
- ENSMUSP00000104055.3, ENSMUST00000108417.10
- Conserved Domains (2) summary
-
- smart00352
Location:201 → 275
- POU; Found in Pit-Oct-Unc transcription factors
- pfam00046
Location:306 → 360
- Homeobox; Homeobox domain
-
NM_001163556.2 → NP_001157028.1 POU domain, class 2, transcription factor 2 isoform 1
See identical proteins and their annotated locations for NP_001157028.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC120393
- Consensus CDS
-
CCDS52143.1
- UniProtKB/Swiss-Prot
- Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q3KR47, Q3U127, Q5XML1, Q5XML2, Q61995, Q61996, Q64245
- UniProtKB/TrEMBL
-
H3BKB7
- Related
- ENSMUSP00000135075.2, ENSMUST00000175774.9
- Conserved Domains (2) summary
-
- smart00352
Location:179 → 253
- POU; Found in Pit-Oct-Unc transcription factors
- pfam00046
Location:284 → 338
- Homeobox; Homeobox domain
-
NM_001417132.1 → NP_001404061.1 POU domain, class 2, transcription factor 2 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_001417133.1 → NP_001404062.1 POU domain, class 2, transcription factor 2 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_001417134.1 → NP_001404063.1 POU domain, class 2, transcription factor 2 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_001417135.1 → NP_001404064.1 POU domain, class 2, transcription factor 2 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_001417136.1 → NP_001404065.1 POU domain, class 2, transcription factor 2 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_001417137.1 → NP_001404066.1 POU domain, class 2, transcription factor 2 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_001417138.1 → NP_001404067.1 POU domain, class 2, transcription factor 2 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_001417139.1 → NP_001404068.1 POU domain, class 2, transcription factor 2 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_001417140.1 → NP_001404069.1 POU domain, class 2, transcription factor 2 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC120393
- UniProtKB/TrEMBL
-
H3BKB7
- Related
- ENSMUSP00000104054.3, ENSMUST00000108416.10
-
NM_001417141.1 → NP_001404070.1 POU domain, class 2, transcription factor 2 isoform 11
Status: VALIDATED
- Source sequence(s)
-
AC120393
-
NM_011138.3 → NP_035268.2 POU domain, class 2, transcription factor 2 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has an additional segment in the coding region, as compared to variant 1. The resulting isoform (2) is longer and has the same N- and C-termini, as compared to isoform 1.
- Source sequence(s)
-
AC120393
- Consensus CDS
-
CCDS39834.1
- UniProtKB/TrEMBL
-
H3BKB7
- Related
- ENSMUSP00000104053.3, ENSMUST00000108415.10
- Conserved Domains (3) summary
-
- smart00352
Location:195 → 269
- POU; Found in Pit-Oct-Unc transcription factors
- pfam00046
Location:300 → 354
- Homeobox; Homeobox domain
- pfam09770
Location:116 → 193
- PAT1; Topoisomerase II-associated protein PAT1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7 Reference GRCm39 C57BL/6J
- Range
-
24790111..24879292 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)