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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001080798.3 → NP_001074267.1 AF4/FMR2 family member 1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AL713989, AL731554
- Consensus CDS
-
CCDS39189.1
- UniProtKB/TrEMBL
- E9Q921, Q5XM34
- Related
- ENSMUSP00000031256.6, ENSMUST00000031256.6
- Conserved Domains (1) summary
-
- pfam05110
Location:17 → 1221
- AF-4; AF-4 proto-oncoprotein
-
NM_001408251.1 → NP_001395180.1 AF4/FMR2 family member 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AL713989, AL731554
- UniProtKB/TrEMBL
-
Q5XM34
-
NM_133919.5 → NP_598680.3 AF4/FMR2 family member 1 isoform 2
See identical proteins and their annotated locations for NP_598680.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate 5'-terminal exon, which results in a different 5' UTR and use of an alternate start codon. It encodes isoform 2, which has a distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AL713989, AL731554
- Consensus CDS
-
CCDS39188.1
- UniProtKB/TrEMBL
- A3KMF4, Q5XM34
- Related
- ENSMUSP00000059744.4, ENSMUST00000054979.10
- Conserved Domains (1) summary
-
- pfam05110
Location:9 → 1213
- AF-4; AF-4 proto-oncoprotein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
103840307..104003188
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036164846.1 → XP_036020739.1 AF4/FMR2 family member 1 isoform X2
- UniProtKB/TrEMBL
-
Q5XM34
- Conserved Domains (3) summary
-
- PHA03247
Location:350 → 687
- PHA03247; large tegument protein UL36; Provisional
- pfam05110
Location:4 → 503
- AF-4; AF-4 proto-oncoprotein
- pfam18876
Location:953 → 1214
- AF-4_C; AF-4 proto-oncoprotein C-terminal region