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    RBBP8-AS1 RBBP8 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101927571, updated on 25-Jan-2025

    Summary

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    Official Symbol
    RBBP8-AS1provided by HGNC
    Official Full Name
    RBBP8 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:58091
    See related
    Ensembl:ENSG00000266850 AllianceGenome:HGNC:58091
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in liver (RPKM 1.4), testis (RPKM 0.7) and 3 other tissues See more
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    Genomic context

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    See RBBP8-AS1 in Genome Data Viewer
    Location:
    18q11.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (22723491..22786837, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (22916399..22979950, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (20303454..20366800, complement)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 1032, pseudogene Neighboring gene GATA motif-containing MPRA enhancer 84 Neighboring gene uncharacterized LOC124904264 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:20363613-20364162 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:20364163-20364712 Neighboring gene uncharacterized LOC124904263 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:20401768-20402604 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13139 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr18:20464856-20466055 Neighboring gene ubiquitin conjugating enzyme E2 C pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. NAP-seq reveals multiple classes of structured noncoding RNAs with regulatory functions. Liu S, et al. Nat Commun, 2024 Mar 18. PMID 38499544, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Clone Names

    • AC090912.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      22723491..22786837 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_110782.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      22916399..22979950 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_110782.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_110782.1: Suppressed sequence

      Description
      NR_110782.1: This RefSeq was removed because currently there is insufficient support for the transcript.
    Nucleotide Protein
    Heading Accession and Version

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