U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    peng penguin [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33112, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    pengprovided by FlyBase
    Official Full Name
    penguinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0015527
    Locus tag
    Dmel_CG1685
    See related
    AllianceGenome:FB:FBgn0015527
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG1685; Dmel\CG1685; pen
    Summary
    Predicted to enable mRNA binding activity. Involved in apposition of dorsal and ventral imaginal disc-derived wing surfaces. Predicted to be active in nucleolus. Is expressed in several structures, including adult head; anterior endoderm; embryonic/larval midgut primordium; gut section; and somatic trunk mesoderm derivative. Orthologous to human PUM3 (pumilio RNA binding family member 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See peng in Genome Data Viewer
    Location:
    19F5-19F5; 1-65 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (21346503..21349843, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (21217530..21220870, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene tweety Neighboring gene flightless I Neighboring gene dodo Neighboring gene small optic lobes Neighboring gene Septin 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Drosophila melanogaster flightless-I gene involved in gastrulation and muscle degeneration encodes gelsolin-like and leucine-rich repeat domains and is conserved in Caenorhabditis elegans and humans. Campbell HD, et al. Proc Natl Acad Sci U S A, 1993 Dec 1. PMID 8248259, Free PMC Article
    2. Drosophila Pin1 prolyl isomerase Dodo is a MAP kinase signal responder during oogenesis. Hsu T, et al. Nat Cell Biol, 2001 Jun. PMID 11389437
    3. Genome-wide analysis of promoter architecture in Drosophila melanogaster. Hoskins RA, et al. Genome Res, 2011 Feb. PMID 21177961, Free PMC Article
    4. The Drosophila melanogaster dodo (dod) gene, conserved in humans, is functionally interchangeable with the ESS1 cell division gene of Saccharomyces cerevisiae. Maleszka R, et al. Proc Natl Acad Sci U S A, 1996 Jan 9. PMID 8552658, Free PMC Article
    5. Sex chromosome-specific regulation in the Drosophila male germline but little evidence for chromosomal dosage compensation or meiotic inactivation. Meiklejohn CD, et al. PLoS Biol, 2011 Aug. PMID 21857805, Free PMC Article

    See all (39) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in apposition of dorsal and ventral imaginal disc-derived wing surfaces IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    penguin
    Names
    CG1685-PA
    peng-PA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      21346503..21349843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078705.3 → NP_523429.1  penguin [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523429.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O61345, Q9VRH2
      Related
      FBpp0076918
      Conserved Domains (2) summary
      cl21719
      Location:183 → 254
      Pumilio; Pumilio-family RNA binding domain
      pfam08144
      Location:438 → 537
      CPL; CPL (NUC119) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O61345.1 O61345

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools