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    NCOA7 nuclear receptor coactivator 7 [ Bos taurus (domestic cattle) ]

    Gene ID: 541071, updated on 30-Jan-2025

    Summary

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    Official Symbol
    NCOA7provided by VGNC
    Official Full Name
    nuclear receptor coactivator 7provided by VGNC
    Primary source
    VGNC:VGNC:108132
    See related
    BGD:BT24373; EnsemblRapid:ENSBTAG00070026971
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See NCOA7 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (25358446..25520329, complement)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 11 homolog Neighboring gene histidine triad nucleotide binding protein 3 Neighboring gene uncharacterized LOC132346207 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene hes related family bHLH transcription factor with YRPW motif 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Molecular characterization and bioinformatics analysis of Ncoa7B, a novel ovulation-associated and reproduction system-specific Ncoa7 isoform. Shkolnik K, et al. Reproduction, 2008 Mar. PMID 18299425
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC151725

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear receptor coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor coactivator 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      25358446..25520329 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024996940.2 → XP_024852708.1  nuclear receptor coactivator 7 isoform X4

      Conserved Domains (2) summary
      smart00584
      Location:744 → 906
      TLDc; domain in TBC and LysM domain containing proteins
      pfam01476
      Location:83 → 125
      LysM; LysM domain

    2. XM_005210720.5 → XP_005210777.1  nuclear receptor coactivator 7 isoform X3

      See identical proteins and their annotated locations for XP_005210777.1

      UniProtKB/TrEMBL
      F1MP72
      Conserved Domains (3) summary
      smart00584
      Location:777 → 939
      TLDc; domain in TBC and LysM domain containing proteins
      COG1388
      Location:88 → 158
      LysM; LysM repeat [Cell wall/membrane/envelope biogenesis]
      pfam01476
      Location:116 → 158
      LysM; LysM domain

    3. XM_059890078.1 → XP_059746061.1  nuclear receptor coactivator 7 isoform X4

    4. XM_005210719.5 → XP_005210776.1  nuclear receptor coactivator 7 isoform X3

      See identical proteins and their annotated locations for XP_005210776.1

      UniProtKB/TrEMBL
      F1MP72
      Conserved Domains (3) summary
      smart00584
      Location:777 → 939
      TLDc; domain in TBC and LysM domain containing proteins
      COG1388
      Location:88 → 158
      LysM; LysM repeat [Cell wall/membrane/envelope biogenesis]
      pfam01476
      Location:116 → 158
      LysM; LysM domain

    5. XM_005210723.5 → XP_005210780.1  nuclear receptor coactivator 7 isoform X4

      See identical proteins and their annotated locations for XP_005210780.1

      Conserved Domains (2) summary
      smart00584
      Location:744 → 906
      TLDc; domain in TBC and LysM domain containing proteins
      pfam01476
      Location:83 → 125
      LysM; LysM domain

    6. XM_005210718.5 → XP_005210775.1  nuclear receptor coactivator 7 isoform X3

      See identical proteins and their annotated locations for XP_005210775.1

      UniProtKB/TrEMBL
      F1MP72
      Related
      ENSBTAP00070036409.1, ENSBTAT00070061171.1
      Conserved Domains (3) summary
      smart00584
      Location:777 → 939
      TLDc; domain in TBC and LysM domain containing proteins
      COG1388
      Location:88 → 158
      LysM; LysM repeat [Cell wall/membrane/envelope biogenesis]
      pfam01476
      Location:116 → 158
      LysM; LysM domain

    7. XM_024996941.2 → XP_024852709.2  nuclear receptor coactivator 7 isoform X5

    8. XM_059890077.1 → XP_059746060.1  nuclear receptor coactivator 7 isoform X2

    9. XM_059890076.1 → XP_059746059.1  nuclear receptor coactivator 7 isoform X1

    10. XM_024996939.2 → XP_024852707.1  nuclear receptor coactivator 7 isoform X4

      Conserved Domains (2) summary
      smart00584
      Location:744 → 906
      TLDc; domain in TBC and LysM domain containing proteins
      pfam01476
      Location:83 → 125
      LysM; LysM domain

    11. XM_059890079.1 → XP_059746062.1  nuclear receptor coactivator 7 isoform X6

    12. XM_003586458.6 → XP_003586506.1  nuclear receptor coactivator 7 isoform X7

      See identical proteins and their annotated locations for XP_003586506.1

      UniProtKB/TrEMBL
      A6QNZ3
      Related
      ENSBTAP00070036392.1, ENSBTAT00070061140.1
      Conserved Domains (1) summary
      smart00584
      Location:57 → 219
      TLDc; domain in TBC and LysM domain containing proteins

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001102254.1: Suppressed sequence

      Description
      NM_001102254.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from chicken: NCOA7 (GeneID:421717).
    Nucleotide Protein Strain
    Heading Accession and Version

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