U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Ssl2 Strictosidine synthase-like 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43424, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Ssl2provided by FlyBase
    Official Full Name
    Strictosidine synthase-like 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0041780
    Locus tag
    Dmel_CG11833
    See related
    AllianceGenome:FB:FBgn0041780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11833; Dmel\CG11833; DmSSl2; SSl2
    Summary
    Predicted to enable arylesterase activity. Predicted to be involved in biosynthetic process. Orthologous to human APMAP (adipocyte plasma membrane associated protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Ssl2 in Genome Data Viewer
    Location:
    98F5-98F5; 3-97 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29030951..29032642, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24856673..24858364, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E6 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45044 Neighboring gene beta1,4-N-acetylgalactosaminyltransferase B Neighboring gene Cleavage and polyadenylation specificity factor 100 Neighboring gene Slu7

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Animal and plant members of a gene family with similarity to alkaloid-synthesizing enzymes. Fabbri M, et al. Biochem Biophys Res Commun, 2000 Apr 29. PMID 10777701
    2. Population genomics of inversion polymorphisms in Drosophila melanogaster. Corbett-Detig RB, et al. PLoS Genet, 2012. PMID 23284285, Free PMC Article
    3. The Effect of Common Inversion Polymorphisms In(2L)t and In(3R)Mo on Patterns of Transcriptional Variation in Drosophila melanogaster. Lavington E, et al. G3 (Bethesda), 2017 Nov 6. PMID 28916647, Free PMC Article
    4. The Drosophila clotting system and its messages for mammals. Theopold U, et al. Dev Comp Immunol, 2014 Jan. PMID 23545286
    5. Insights from natural host-parasite interactions: the Drosophila model. Keebaugh ES, et al. Dev Comp Immunol, 2014 Jan. PMID 23764256, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables arylesterase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables strictosidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    strictosidine synthase-like 2
    Names
    CG11833-PB
    Ssl2-PB
    strictosidine-synthase-like protein2
    NP_651656.2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      29030951..29032642 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143399.3 → NP_651656.2  strictosidine synthase-like 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651656.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VAQ9
      Conserved Domains (2) summary
      COG3386
      Location:80 → 284
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:174 → 256
      Str_synth; Strictosidine synthase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VAQ9 Q9VAQ9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools