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    CG4101 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39857, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG4101provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0025558
    Locus tag
    Dmel_CG4101
    See related
    AllianceGenome:FB:FBgn0025558
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-73B1; anon73B1; Dmel\CG4101
    Summary
    Predicted to be located in membrane. Is expressed in organism. Orthologous to human MANBAL (mannosidase beta like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG4101 in Genome Data Viewer
    Location:
    73B1-73B1; 3-44 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16612486..16612950)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16605586..16606050)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Proteasome beta6 subunit Neighboring gene antisense RNA:CR45865 Neighboring gene Suppressor of ref(2)P sterility Neighboring gene Mo25 Neighboring gene Abl tyrosine kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and molecular features of Su(P), a gene that interacts with ref(2)P in male fertility of Drosophila melanogaster. Bichon A, et al. Mol Genet Genomics, 2001 Apr. PMID 11361347
    2. Fragile X protein functions with lgl and the par complex in flies and mice. Zarnescu DC, et al. Dev Cell, 2005 Jan. PMID 15621528
    3. Base Editing of Somatic Cells Using CRISPR-Cas9 in Drosophila. Marr E, et al. CRISPR J, 2021 Dec. PMID 34813372, Free PMC Article
    4. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article
    5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG4101-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      16612486..16612950
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140651.3 → NP_648908.1  uncharacterized protein Dmel_CG4101 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648908.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O77286, Q4V3Y1
      UniProtKB/TrEMBL
      A0A1B2AJ70
      Related
      FBpp0075074
      Conserved Domains (1) summary
      pfam06783
      Location:12 → 86
      UPF0239; uncharacterized protein family (UPF0239)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O77286.1 O77286

    Gene LinkOut

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