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    TEX2 testis expressed 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 513262, updated on 27-Dec-2024

    Summary

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    Official Symbol
    TEX2provided by VGNC
    Official Full Name
    testis expressed 2provided by VGNC
    Primary source
    VGNC:VGNC:35763
    See related
    BGD:BT27729; Ensembl:ENSBTAG00000004723
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TEX2 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (48368421..48482727, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101902037 Neighboring gene small nucleolar RNA SNORD104 Neighboring gene small nucleolar RNA SNORA76 Neighboring gene uncharacterized LOC132343102 Neighboring gene uncharacterized LOC132343101 Neighboring gene platelet and endothelial cell adhesion molecule 1 Neighboring gene uncharacterized LOC112442686 Neighboring gene mast cell immunoglobulin like receptor 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC148486

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    testis-expressed protein 2
    Names
    testis expressed sequence 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101970.2 → NP_001095440.1  testis-expressed protein 2

      See identical proteins and their annotated locations for NP_001095440.1

      Status: PROVISIONAL

      Source sequence(s)
      BC148108
      UniProtKB/TrEMBL
      A6QLW4
      Related
      ENSBTAP00000006196.6, ENSBTAT00000006196.7

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      48368421..48482727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024980007.2 → XP_024835775.1  testis-expressed protein 2 isoform X2

    2. XM_059877966.1 → XP_059733949.1  testis-expressed protein 2 isoform X1

      UniProtKB/TrEMBL
      F1MJA6

    3. XM_024980008.2 → XP_024835776.1  testis-expressed protein 2 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

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