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    ZNF385A zinc finger protein 385A [ Bos taurus (domestic cattle) ]

    Gene ID: 540045, updated on 1-Jan-2025

    Summary

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    Official Symbol
    ZNF385Aprovided by VGNC
    Official Full Name
    zinc finger protein 385Aprovided by VGNC
    Primary source
    VGNC:VGNC:37263
    See related
    Ensembl:ENSBTAG00000015604
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF385A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (25687002..25707959)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112446664 Neighboring gene integrin subunit alpha 5 Neighboring gene uncharacterized LOC112446663 Neighboring gene G protein-coupled receptor 84 Neighboring gene COPI coat complex subunit zeta 1 Neighboring gene microRNA mir-148b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA localization resulting in post-transcriptional regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 385A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206001.1 → NP_001192930.1  zinc finger protein 385A

      See identical proteins and their annotated locations for NP_001192930.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000005
      UniProtKB/TrEMBL
      Q08DL3
      Conserved Domains (2) summary
      sd00020
      Location:203 → 225
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12874
      Location:261 → 285
      zf-met; Zinc-finger of C2H2 type

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      25687002..25707959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005206116.5 → XP_005206173.1  zinc finger protein 385A isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LNE3
      Conserved Domains (2) summary
      sd00020
      Location:183 → 205
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12874
      Location:241 → 265
      zf-met; Zinc-finger of C2H2 type

    2. XM_005206115.5 → XP_005206172.1  zinc finger protein 385A isoform X1

      UniProtKB/TrEMBL
      F6QJD6, Q08DL3
      Related
      ENSBTAP00000038377.5, ENSBTAT00000038564.5
      Conserved Domains (2) summary
      sd00020
      Location:210 → 232
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12874
      Location:268 → 292
      zf-met; Zinc-finger of C2H2 type

    3. XM_015470929.3 → XP_015326415.1  zinc finger protein 385A isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LNE3
      Conserved Domains (2) summary
      sd00020
      Location:183 → 205
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12874
      Location:241 → 265
      zf-met; Zinc-finger of C2H2 type

    4. XM_024992032.2 → XP_024847800.1  zinc finger protein 385A isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LNE3
      Related
      ENSBTAP00000061505.2, ENSBTAT00000080246.2
      Conserved Domains (2) summary
      sd00020
      Location:183 → 205
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12874
      Location:241 → 265
      zf-met; Zinc-finger of C2H2 type
    Nucleotide Protein Strain
    Heading Accession and Version

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