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    TMED10 transmembrane p24 trafficking protein 10 [ Bos taurus (domestic cattle) ]

    Gene ID: 529761, updated on 30-Jan-2025

    Summary

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    Official Symbol
    TMED10provided by VGNC
    Official Full Name
    transmembrane p24 trafficking protein 10provided by VGNC
    Primary source
    VGNC:VGNC:35935
    See related
    EnsemblRapid:ENSBTAG00070024040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    TMP21
    Orthologs
    human mouse all
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    Genomic context

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    See TMED10 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (86372515..86407516, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene zinc finger C2HC-type containing 1C Neighboring gene NIMA related kinase 9 Neighboring gene Fos proto-oncogene, AP-1 transcription factor subunit Neighboring gene uncharacterized LOC112448568

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in COPI-coated vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in COPII-coated ER to Golgi transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane emp24 domain-containing protein 10
    Names
    21 kDa transmembrane-trafficking protein
    p24 family protein delta-1
    p24delta1
    transmembrane emp24-like trafficking protein 10
    transmembrane protein Tmp21
    transmembrane trafficking protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040549.2 → NP_001035639.1  transmembrane emp24 domain-containing protein 10 precursor

      See identical proteins and their annotated locations for NP_001035639.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123529
      UniProtKB/Swiss-Prot
      A4FV04, Q5E971
      Conserved Domains (1) summary
      pfam01105
      Location:31 → 213
      EMP24_GP25L; emp24/gp25L/p24 family/GOLD

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      86372515..86407516 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024997589.2 → XP_024853357.1  transmembrane emp24 domain-containing protein 10 isoform X1

      UniProtKB/Swiss-Prot
      A4FV04, Q5E971
      Related
      ENSBTAP00070032423.1, ENSBTAT00070054083.1
      Conserved Domains (1) summary
      pfam01105
      Location:31 → 213
      EMP24_GP25L; emp24/gp25L/p24 family/GOLD
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5E971.1 GenPept UniProtKB/Swiss-Prot:Q5E971

    Gene LinkOut

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