U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PPP1R3C protein phosphatase 1 regulatory subunit 3C [ Bos taurus (domestic cattle) ]

    Gene ID: 539466, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PPP1R3Cprovided by VGNC
    Official Full Name
    protein phosphatase 1 regulatory subunit 3Cprovided by VGNC
    Primary source
    VGNC:VGNC:33244
    See related
    BGD:BT17753; Ensembl:ENSBTAG00000014831
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PPP1R3C in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (13208456..13213362, complement)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene polycomb group ring finger 5 Neighboring gene HECT domain E3 ubiquitin protein ligase 2 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene tankyrase 2 Neighboring gene fibroblast growth factor binding protein 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC140560

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycogen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase 1 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of glycogen biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of protein phosphatase type 1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein phosphatase 1 regulatory subunit 3C
    Names
    PP1 subunit R5
    PTG
    R5
    protein phosphatase 1 regulatory subunit 5
    protein phosphatase 1, regulatory (inhibitor) subunit 3C
    protein targeting to glycogen

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076164.2 → NP_001069632.1  protein phosphatase 1 regulatory subunit 3C

      Status: PROVISIONAL

      Source sequence(s)
      BC120042
      UniProtKB/Swiss-Prot
      A7E3S7, Q0VCR4
      UniProtKB/TrEMBL
      A0AAA9TEI0
      Related
      ENSBTAP00000019753.3, ENSBTAT00000019753.5
      Conserved Domains (1) summary
      pfam03370
      Location:153 → 256
      CBM_21; Carbohydrate/starch-binding module (family 21)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      13208456..13213362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VCR4.1 GenPept UniProtKB/Swiss-Prot:Q0VCR4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.