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    STK40 serine/threonine kinase 40 [ Bos taurus (domestic cattle) ]

    Gene ID: 515723, updated on 27-Dec-2024

    Summary

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    Official Symbol
    STK40provided by VGNC
    Official Full Name
    serine/threonine kinase 40provided by VGNC
    Primary source
    VGNC:VGNC:35402
    See related
    BGD:BT16337; Ensembl:ENSBTAG00000015969
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See STK40 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (109490579..109528381)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104971845 Neighboring gene LSM10, U7 small nuclear RNA associated Neighboring gene eva-1 homolog B Neighboring gene SH3 domain containing 21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC139116

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase 40
    Names
    SINK-homologous serine/threonine kinase
    NP_001069195.1
    XP_005204789.1
    XP_010801923.1
    XP_010801924.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075727.1 → NP_001069195.1  serine/threonine-protein kinase 40

      See identical proteins and their annotated locations for NP_001069195.1

      Status: PROVISIONAL

      Source sequence(s)
      BC118150
      UniProtKB/Swiss-Prot
      Q17QV9
      Related
      ENSBTAP00000021243.5, ENSBTAT00000021243.6
      Conserved Domains (1) summary
      cd13974
      Location:38 → 330
      STKc_SHIK; Catalytic domain of the Serine/Threonine kinase, SINK-homologous inhibitory kinase

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      109490579..109528381
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005204732.5 → XP_005204789.1  serine/threonine-protein kinase 40 isoform X1

      See identical proteins and their annotated locations for XP_005204789.1

      UniProtKB/Swiss-Prot
      Q17QV9
      Conserved Domains (1) summary
      cd13974
      Location:38 → 330
      STKc_SHIK; Catalytic domain of the Serine/Threonine kinase, SINK-homologous inhibitory kinase

    2. XM_010803622.3 → XP_010801924.1  serine/threonine-protein kinase 40 isoform X1

      See identical proteins and their annotated locations for XP_010801924.1

      UniProtKB/Swiss-Prot
      Q17QV9
      Conserved Domains (1) summary
      cd13974
      Location:38 → 330
      STKc_SHIK; Catalytic domain of the Serine/Threonine kinase, SINK-homologous inhibitory kinase

    3. XM_010803621.4 → XP_010801923.1  serine/threonine-protein kinase 40 isoform X1

      See identical proteins and their annotated locations for XP_010801923.1

      UniProtKB/Swiss-Prot
      Q17QV9
      Conserved Domains (1) summary
      cd13974
      Location:38 → 330
      STKc_SHIK; Catalytic domain of the Serine/Threonine kinase, SINK-homologous inhibitory kinase
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q17QV9.1 GenPept UniProtKB/Swiss-Prot:Q17QV9

    Gene LinkOut

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