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    ZDHHC23 zinc finger DHHC-type palmitoyltransferase 23 [ Bos taurus (domestic cattle) ]

    Gene ID: 512177, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ZDHHC23provided by VGNC
    Official Full Name
    zinc finger DHHC-type palmitoyltransferase 23provided by VGNC
    Primary source
    VGNC:VGNC:37139
    See related
    BGD:BT20125; Ensembl:ENSBTAG00000004974
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ZDHHC23 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (58619102..58633954)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene GRAM domain containing 1C Neighboring gene elongation factor 1-alpha 1-like Neighboring gene uncharacterized LOC112448295 Neighboring gene coiled-coil domain containing 191 Neighboring gene queuine tRNA-ribosyltransferase accessory subunit 2 Neighboring gene dopamine receptor D3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-cysteine S-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-L-cysteine S-palmitoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    palmitoyltransferase ZDHHC23
    Names
    zinc finger DHHC-type containing 23
    NP_001179243.1
    XP_005201357.1
    XP_005201358.1
    XP_059735913.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192314.1 → NP_001179243.1  palmitoyltransferase ZDHHC23

      See identical proteins and their annotated locations for NP_001179243.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000001
      UniProtKB/TrEMBL
      A0AAA9TVJ9, E1BC01
      Related
      ENSBTAP00000101173.1, ENSBTAT00000105811.1
      Conserved Domains (2) summary
      pfam01529
      Location:249 → 378
      zf-DHHC; DHHC palmitoyltransferase
      cl21590
      Location:75 → 143
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      58619102..58633954
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005201300.5 → XP_005201357.1  palmitoyltransferase ZDHHC23 isoform X1

      See identical proteins and their annotated locations for XP_005201357.1

      UniProtKB/TrEMBL
      A0AAA9TVJ9, E1BC01
      Conserved Domains (2) summary
      pfam01529
      Location:249 → 378
      zf-DHHC; DHHC palmitoyltransferase
      cl21590
      Location:75 → 143
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    2. XM_059879930.1 → XP_059735913.1  palmitoyltransferase ZDHHC23 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TVJ9, E1BC01

    3. XM_005201301.5 → XP_005201358.1  palmitoyltransferase ZDHHC23 isoform X2

      UniProtKB/TrEMBL
      E1BC01
      Conserved Domains (2) summary
      pfam01529
      Location:249 → 375
      zf-DHHC; DHHC palmitoyltransferase
      cl21590
      Location:75 → 143
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
    Nucleotide Protein Strain
    Heading Accession and Version

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