U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    EMCN endomucin [ Bos taurus (domestic cattle) ]

    Gene ID: 616367, updated on 29-Jan-2025

    Summary

    Official Symbol
    EMCNprovided by VGNC
    Official Full Name
    endomucinprovided by VGNC
    Primary source
    VGNC:VGNC:53710
    See related
    BGD:BT23057; Ensembl:ENSBTAG00000034206
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See EMCN in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (24210613..24332247)

    Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene protein phosphatase 3 catalytic subunit alpha Neighboring gene uncharacterized LOC112447197 Neighboring gene uncharacterized LOC104972699 Neighboring gene DNA damage inducible transcript 4 like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076420.2NP_001069888.1  endomucin precursor

      See identical proteins and their annotated locations for NP_001069888.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120029
      UniProtKB/TrEMBL
      A0A3Q1LRZ8, Q0VCS5
      Related
      ENSBTAP00070003499.1, ENSBTAT00070006035.1
      Conserved Domains (1) summary
      pfam07010
      Location:1250
      Endomucin; Endomucin

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      24210613..24332247
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005207702.5XP_005207759.1  endomucin isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LRZ8, F1N1S5
      Conserved Domains (1) summary
      pfam07010
      Location:1261
      Endomucin; Endomucin
    2. XM_010805951.4XP_010804253.1  endomucin isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LRZ8, A0A3Q1MJU8
      Conserved Domains (1) summary
      pfam07010
      Location:1242
      Endomucin; Endomucin
    3. XM_010805950.4XP_010804252.1  endomucin isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LP23, A0A3Q1LRZ8
      Conserved Domains (1) summary
      pfam07010
      Location:1248
      Endomucin; Endomucin
    4. XM_010805952.4XP_010804254.1  endomucin isoform X4

      UniProtKB/TrEMBL
      A0A3Q1LRZ8, A0A3Q1N0Y0
      Related
      ENSBTAP00070003516.1, ENSBTAT00070006072.1
      Conserved Domains (1) summary
      pfam07010
      Location:1235
      Endomucin; Endomucin