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    FADD Fas associated via death domain [ Bos taurus (domestic cattle) ]

    Gene ID: 493720, updated on 27-Dec-2024

    Summary

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    Official Symbol
    FADDprovided by VGNC
    Official Full Name
    Fas associated via death domainprovided by VGNC
    Primary source
    VGNC:VGNC:28700
    See related
    BGD:BT10146; Ensembl:ENSBTAG00000018274
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See FADD in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (47373324..47375728)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132344212 Neighboring gene uncharacterized LOC112444934 Neighboring gene anoctamin 1 Neighboring gene adenylosuccinate lyase-like Neighboring gene PTPRF interacting protein alpha 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Characterization of bovine FAS-associated death domain gene. Szperka ME, et al. Anim Genet, 2005 Feb. PMID 15670133
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC142515

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    FAS-associated death domain protein
    Names
    FAS-associating death domain-containing protein
    Fas (TNFRSF6)-associated via death domain
    protein FADD

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007816.1 → NP_001007817.1  FAS-associated death domain protein

      See identical proteins and their annotated locations for NP_001007817.1

      Status: PROVISIONAL

      Source sequence(s)
      AY725483
      UniProtKB/Swiss-Prot
      Q645M6
      Related
      ENSBTAP00000024322.4, ENSBTAT00000024322.6
      Conserved Domains (2) summary
      cd08306
      Location:97 → 179
      Death_FADD; Fas-associated Death Domain protein-protein interaction domain
      cd08336
      Location:2 → 67
      DED_FADD; Death Effector Domain found in Fas-Associated via Death Domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      47373324..47375728
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q645M6.1 GenPept UniProtKB/Swiss-Prot:Q645M6

    Gene LinkOut

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