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    CXADR CXADR Ig-like cell adhesion molecule [ Bos taurus (domestic cattle) ]

    Gene ID: 281733, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CXADRprovided by VGNC
    Official Full Name
    CXADR Ig-like cell adhesion moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:53521
    See related
    BGD:BT16812; Ensembl:ENSBTAG00000004869
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CXADR in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (19437583..19502361, complement)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112447286 Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene BTG anti-proliferation factor 3 Neighboring gene tubulin alpha-1A chain-like Neighboring gene N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Characterization of a cDNA encoding the bovine coxsackie and adenovirus receptor. Thoelen I, et al. Biochem Biophys Res Commun, 2001 Nov 9. PMID 11688979
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homotypic cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basolateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intercalated disc IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coxsackievirus and adenovirus receptor homolog
    Names
    BCAR
    coxsackie virus and adenovirus receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174298.4 → NP_776723.1  coxsackievirus and adenovirus receptor homolog precursor

      See identical proteins and their annotated locations for NP_776723.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102845
      UniProtKB/Swiss-Prot
      Q3SZH9, Q8WMV3
      UniProtKB/TrEMBL
      A0AAF6YMT6
      Related
      ENSBTAP00000006400.4, ENSBTAT00000006400.5
      Conserved Domains (2) summary
      pfam07686
      Location:29 → 138
      V-set; Immunoglobulin V-set domain
      cd00096
      Location:158 → 223
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      19437583..19502361 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010800940.4 → XP_010799242.1  coxsackievirus and adenovirus receptor homolog isoform X2

      Conserved Domains (2) summary
      pfam07686
      Location:29 → 138
      V-set; Immunoglobulin V-set domain
      cd00096
      Location:158 → 223
      Ig; Immunoglobulin domain

    2. XM_010800939.4 → XP_010799241.1  coxsackievirus and adenovirus receptor homolog isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LT83, A0AAF6YMT6
      Related
      ENSBTAP00000063652.1, ENSBTAT00000085602.2
      Conserved Domains (2) summary
      pfam07686
      Location:29 → 138
      V-set; Immunoglobulin V-set domain
      cd00096
      Location:158 → 223
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8WMV3.1 GenPept UniProtKB/Swiss-Prot:Q8WMV3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.