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    TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit [ Bos taurus (domestic cattle) ]

    Gene ID: 532418, updated on 27-Dec-2024

    Summary

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    Official Symbol
    TRMT10Cprovided by VGNC
    Official Full Name
    tRNA methyltransferase 10C, mitochondrial RNase P subunitprovided by VGNC
    Primary source
    VGNC:VGNC:36367
    See related
    BGD:BT21800; Ensembl:ENSBTAG00000024027
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    RG9MTD1
    Orthologs
    human mouse all
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    Genomic context

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    See TRMT10C in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (45988281..45992514)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 7 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene putative protein FAM172B Neighboring gene PEST proteolytic signal containing nuclear protein Neighboring gene zinc finger and BTB domain containing 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC137283

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial tRNA 5'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of mitochondrial translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA methyltransferase 10 homolog C
    Names
    RNA (guanine-9-) methyltransferase domain containing 1
    RNA (guanine-9-)-methyltransferase domain-containing protein 1
    mRNA methyladenosine-N(1)-methyltransferase
    mitochondrial RNase P protein 1
    mitochondrial ribonuclease P protein 1
    tRNA (adenine(9)-N(1))-methyltransferase
    tRNA (guanine(9)-N(1))-methyltransferase
    NP_001039788.1
    XP_005201287.1
    XP_005201288.1
    XP_005201289.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046323.2 → NP_001039788.1  tRNA methyltransferase 10 homolog C

      See identical proteins and their annotated locations for NP_001039788.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112774
      UniProtKB/TrEMBL
      A0A452DJ37
      Conserved Domains (1) summary
      cl00407
      Location:209 → 376
      tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      45988281..45992514
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005201231.5 → XP_005201288.1  tRNA methyltransferase 10 homolog C isoform X1

      See identical proteins and their annotated locations for XP_005201288.1

      UniProtKB/Swiss-Prot
      Q2KI45
      Conserved Domains (1) summary
      cl00407
      Location:215 → 382
      tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase

    2. XM_005201230.5 → XP_005201287.1  tRNA methyltransferase 10 homolog C isoform X1

      See identical proteins and their annotated locations for XP_005201287.1

      UniProtKB/Swiss-Prot
      Q2KI45
      Conserved Domains (1) summary
      cl00407
      Location:215 → 382
      tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase

    3. XM_005201232.5 → XP_005201289.1  tRNA methyltransferase 10 homolog C isoform X1

      See identical proteins and their annotated locations for XP_005201289.1

      UniProtKB/Swiss-Prot
      Q2KI45
      Related
      ENSBTAP00000033017.4, ENSBTAT00000033093.4
      Conserved Domains (1) summary
      cl00407
      Location:215 → 382
      tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2KI45.2 GenPept UniProtKB/Swiss-Prot:Q2KI45

    Gene LinkOut

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