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    PIGW phosphatidylinositol glycan anchor biosynthesis class W [ Bos taurus (domestic cattle) ]

    Gene ID: 768052, updated on 27-Dec-2024

    Summary

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    Official Symbol
    PIGWprovided by VGNC
    Official Full Name
    phosphatidylinositol glycan anchor biosynthesis class Wprovided by VGNC
    Primary source
    VGNC:VGNC:32881
    See related
    BGD:BT17645; Ensembl:ENSBTAG00000034396
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    PIG-W
    Orthologs
    human mouse all
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    Genomic context

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    See PIGW in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (12884490..12887669)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene zinc finger HIT-type containing 3 Neighboring gene small nucleolar RNA SNORA11 Neighboring gene myosin XIX Neighboring gene uncharacterized LOC107131496 Neighboring gene gametogenetin binding protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC138970

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glucosaminyl-phosphatidylinositol O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol-glycan biosynthesis class W protein
    Names
    phosphatidylinositol glycan, class W

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077109.1 → NP_001070577.1  phosphatidylinositol-glycan biosynthesis class W protein

      See identical proteins and their annotated locations for NP_001070577.1

      Status: PROVISIONAL

      Source sequence(s)
      BC116121
      UniProtKB/Swiss-Prot
      Q1LZA4
      Related
      ENSBTAP00000077793.1, ENSBTAT00000134351.1
      Conserved Domains (1) summary
      cl02109
      Location:4 → 489
      GWT1; GWT1

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      12884490..12887669
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005220041.5 → XP_005220098.1  phosphatidylinositol-glycan biosynthesis class W protein isoform X1

      See identical proteins and their annotated locations for XP_005220098.1

      UniProtKB/TrEMBL
      F1N3J6
      Related
      ENSBTAP00000098904.1, ENSBTAT00000129264.1
      Conserved Domains (1) summary
      cl02109
      Location:4 → 489
      GWT1; GWT1

    2. XM_059878281.1 → XP_059734264.1  phosphatidylinositol-glycan biosynthesis class W protein isoform X1

      UniProtKB/TrEMBL
      F1N3J6
      Related
      ENSBTAP00000045720.2, ENSBTAT00000048729.4
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1LZA4.1 GenPept UniProtKB/Swiss-Prot:Q1LZA4

    Gene LinkOut

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