These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001075253.2 → NP_001068721.1  pro-interleukin-16

   See identical proteins and their annotated locations for NP_001068721.1

   Status: VALIDATED

   Source sequence(s)

   BT026153, NKLS02000021

   UniProtKB/Swiss-Prot

   Q0V8R5

   Conserved Domains (4) summary

   smart00228
   Location:529 → 615

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:407 → 484

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09770
   Location:135 → 271

   PAT1; Topoisomerase II-associated protein PAT1

   cl29137
   Location:175 → 239

   Trypan_PARP; Procyclic acidic repetitive protein (PARP)

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference ARS-UCD2.0 Primary Assembly

Genomic

1. NC_037348.1 Reference ARS-UCD2.0 Primary Assembly

   Range

   26973354..27099796

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_059878979.1 → XP_059734962.1  pro-interleukin-16 isoform X5

   UniProtKB/TrEMBL

   A0AAF6YVJ6

2. XM_024981655.2 → XP_024837423.1  pro-interleukin-16 isoform X1

   UniProtKB/TrEMBL

   A0AAF6YVJ6

   Conserved Domains (2) summary

   cd00992
   Location:1154 → 1231

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl28033
   Location:653 → 1018

   Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

3. XM_024981659.2 → XP_024837427.1  pro-interleukin-16 isoform X3

   UniProtKB/TrEMBL

   A0AAF6YVJ6

   Related

   ENSBTAP00000014556.7, ENSBTAT00000014556.7

   Conserved Domains (3) summary

   smart00228
   Location:1277 → 1363

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1154 → 1231

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl28033
   Location:653 → 1018

   Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

4. XM_024981657.2 → XP_024837425.1  pro-interleukin-16 isoform X2

   UniProtKB/TrEMBL

   A0AAF6YVJ6

   Conserved Domains (2) summary

   cd00992
   Location:1154 → 1231

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl28033
   Location:653 → 1018

   Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

5. XM_024981660.2 → XP_024837428.1  pro-interleukin-16 isoform X4

   UniProtKB/TrEMBL

   A0AAA9TS06, A0AAF6YVJ6

   Related

   ENSBTAP00000100108.1, ENSBTAT00000117686.1

   Conserved Domains (3) summary

   smart00228
   Location:1276 → 1362

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1154 → 1231

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl28033
   Location:653 → 1018

   Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

6. XM_024981656.2 → XP_024837424.1  pro-interleukin-16 isoform X1

   UniProtKB/TrEMBL

   A0AAF6YVJ6

   Conserved Domains (2) summary

   cd00992
   Location:1154 → 1231

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl28033
   Location:653 → 1018

   Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region