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    TMEM53 transmembrane protein 53 [ Bos taurus (domestic cattle) ]

    Gene ID: 540738, updated on 27-Dec-2024

    Summary

    Official Symbol
    TMEM53provided by VGNC
    Official Full Name
    transmembrane protein 53provided by VGNC
    Primary source
    VGNC:VGNC:36096
    See related
    BGD:BT19089
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See TMEM53 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (101355012..101371875)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene armadillo like helical domain containing 1 Neighboring gene proteasome assembly chaperone 3-like Neighboring gene uncharacterized LOC112446024 Neighboring gene ring finger protein 220 Neighboring gene uncharacterized LOC112446025

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038572.1NP_001033661.1  transmembrane protein 53

      See identical proteins and their annotated locations for NP_001033661.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109854
      UniProtKB/Swiss-Prot
      Q2TBP5
      Conserved Domains (1) summary
      pfam05705
      Location:36272
      DUF829; Eukaryotic protein of unknown function (DUF829)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      101355012..101371875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024989647.2XP_024845415.1  transmembrane protein 53 isoform X1

      Conserved Domains (1) summary
      pfam05705
      Location:46282
      DUF829; Eukaryotic protein of unknown function (DUF829)
    2. XM_059884812.1XP_059740795.1  transmembrane protein 53 isoform X2