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    OVOL1 ovo like transcriptional repressor 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 513727, updated on 29-Jan-2025

    Summary

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    Official Symbol
    OVOL1provided by VGNC
    Official Full Name
    ovo like transcriptional repressor 1provided by VGNC
    Primary source
    VGNC:VGNC:32505
    See related
    BGD:BT29017; Ensembl:ENSBTAG00000012656
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See OVOL1 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (43908693..43919733)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene ribonuclease H2 subunit C Neighboring gene adaptor related protein complex 5 subunit beta 1 Neighboring gene trichohyalin Neighboring gene uncharacterized LOC789733 Neighboring gene uncharacterized LOC132344224 Neighboring gene cofilin 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC155103

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in epidermal cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative transcription factor Ovo-like 1
    Names
    OVO-like 1 binding protein
    ovo-like 1(Drosophila)
    ovo-like zinc finger 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081521.1 → NP_001074990.1  putative transcription factor Ovo-like 1

      See identical proteins and their annotated locations for NP_001074990.1

      Status: PROVISIONAL

      Source sequence(s)
      BC133390
      UniProtKB/Swiss-Prot
      A2VDT4
      Related
      ENSBTAP00070048238.1, ENSBTAT00070079545.1
      Conserved Domains (2) summary
      sd00017
      Location:120 → 140
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:160 → 185
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      43908693..43919733
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015461267.3 → XP_015316753.1  putative transcription factor Ovo-like 1 isoform X1

      Conserved Domains (2) summary
      sd00017
      Location:58 → 78
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:98 → 123
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A2VDT4.1 GenPept UniProtKB/Swiss-Prot:A2VDT4

    Gene LinkOut

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