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    ZMYM1 zinc finger MYM-type containing 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 527379, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ZMYM1provided by VGNC
    Official Full Name
    zinc finger MYM-type containing 1provided by VGNC
    Primary source
    VGNC:VGNC:37198
    See related
    BGD:BT27343; Ensembl:ENSBTAG00000006555
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    ZNF262
    Orthologs
    human mouse all
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    Genomic context

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    See ZMYM1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (110595087..110623016, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene zinc finger MYM-type containing 4 Neighboring gene large ribosomal subunit protein eL6-like Neighboring gene splicing factor proline and glutamine rich Neighboring gene small ribosomal subunit protein eS12-like Neighboring gene ribonuclease P protein subunit p20-like Neighboring gene zinc finger MYM-type containing 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC127968

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger MYM-type protein 1
    Names
    zinc finger protein 262

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205509.3 → NP_001192438.2  zinc finger MYM-type protein 1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000003
      Conserved Domains (4) summary
      smart00597
      Location:460 → 537
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:1051 → 1122
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam06467
      Location:130 → 171
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam14291
      Location:542 → 730
      DUF4371; Domain of unknown function (DUF4371)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      110595087..110623016 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010803647.4 → XP_010801949.2  zinc finger MYM-type protein 1 isoform X7

      Conserved Domains (3) summary
      smart00597
      Location:187 → 264
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:778 → 849
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam14291
      Location:269 → 457
      DUF4371; Domain of unknown function (DUF4371)

    2. XM_005204764.5 → XP_005204821.2  zinc finger MYM-type protein 1 isoform X4

      Conserved Domains (4) summary
      smart00597
      Location:374 → 451
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:965 → 1036
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam06467
      Location:58 → 99
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam14291
      Location:456 → 644
      DUF4371; Domain of unknown function (DUF4371)

    3. XM_015466352.3 → XP_015321838.2  zinc finger MYM-type protein 1 isoform X5

      Conserved Domains (4) summary
      smart00597
      Location:353 → 430
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:944 → 1015
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam06467
      Location:108 → 149
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam14291
      Location:435 → 623
      DUF4371; Domain of unknown function (DUF4371)

    4. XM_005204762.5 → XP_005204819.2  zinc finger MYM-type protein 1 isoform X2

      UniProtKB/TrEMBL
      E1BC73
      Related
      ENSBTAP00000053749.3, ENSBTAT00000061426.4
      Conserved Domains (4) summary
      smart00597
      Location:424 → 501
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:1015 → 1086
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam06467
      Location:108 → 149
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam14291
      Location:506 → 694
      DUF4371; Domain of unknown function (DUF4371)

    5. XM_005204763.5 → XP_005204820.2  zinc finger MYM-type protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1MFI1
      Related
      ENSBTAP00000069887.2, ENSBTAT00000073581.2
      Conserved Domains (4) summary
      smart00597
      Location:375 → 452
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:966 → 1037
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam06467
      Location:130 → 171
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam14291
      Location:457 → 645
      DUF4371; Domain of unknown function (DUF4371)

    6. XM_005204761.5 → XP_005204818.2  zinc finger MYM-type protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M2B0
      Related
      ENSBTAP00000062238.2, ENSBTAT00000082360.2
      Conserved Domains (4) summary
      smart00597
      Location:446 → 523
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:1037 → 1108
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam06467
      Location:130 → 171
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam14291
      Location:528 → 716
      DUF4371; Domain of unknown function (DUF4371)

    7. XM_010803646.4 → XP_010801948.2  zinc finger MYM-type protein 1 isoform X4

      Conserved Domains (4) summary
      smart00597
      Location:374 → 451
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:965 → 1036
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam06467
      Location:58 → 99
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam14291
      Location:456 → 644
      DUF4371; Domain of unknown function (DUF4371)

    8. XM_010803645.4 → XP_010801947.2  zinc finger MYM-type protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M2B0
      Conserved Domains (4) summary
      smart00597
      Location:446 → 523
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam05699
      Location:1037 → 1108
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
      pfam06467
      Location:130 → 171
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
      pfam14291
      Location:528 → 716
      DUF4371; Domain of unknown function (DUF4371)

    9. XM_059884603.1 → XP_059740586.1  zinc finger MYM-type protein 1 isoform X8

    10. XM_059884602.1 → XP_059740585.1  zinc finger MYM-type protein 1 isoform X6

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001035371.1: Suppressed sequence

      Description
      NM_001035371.1: This RefSeq was suppressed temporarily because it does not encode a complete product based on comparison to the human ortholog.
    Nucleotide Protein Strain
    Heading Accession and Version

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