U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FAR2 fatty acyl-CoA reductase 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 534380, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    FAR2provided by VGNC
    Official Full Name
    fatty acyl-CoA reductase 2provided by VGNC
    Primary source
    VGNC:VGNC:28864
    See related
    BGD:BT19617; Ensembl:ENSBTAG00000011095
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    MLSTD1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See FAR2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (80280497..80457957, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene ovochymase 1 Neighboring gene ERGIC and golgi 2 Neighboring gene large ribosomal subunit protein eL32-like Neighboring gene uncharacterized LOC112446617 Neighboring gene coiled-coil domain containing 91 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC139657

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alcohol-forming very long-chain fatty acyl-CoA reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in long-chain fatty-acyl-CoA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    fatty acyl-CoA reductase 2
    Names
    male sterility domain containing 1
    male sterility domain-containing protein 1
    NP_001069490.1
    XP_005206959.1
    XP_010803676.1
    XP_059742529.1
    XP_059742530.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076022.1 → NP_001069490.1  fatty acyl-CoA reductase 2

      See identical proteins and their annotated locations for NP_001069490.1

      Status: PROVISIONAL

      Source sequence(s)
      BC119968
      UniProtKB/Swiss-Prot
      Q0P5J1
      UniProtKB/TrEMBL
      A0AAA9TJJ9
      Related
      ENSBTAP00000014725.5, ENSBTAT00000014725.6
      Conserved Domains (2) summary
      cd05236
      Location:11 → 330
      FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
      pfam03015
      Location:357 → 447
      Sterile; Male sterility protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      80280497..80457957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059886546.1 → XP_059742529.1  fatty acyl-CoA reductase 2 isoform X1

      UniProtKB/Swiss-Prot
      Q0P5J1
      UniProtKB/TrEMBL
      A0AAA9TJJ9

    2. XM_059886547.1 → XP_059742530.1  fatty acyl-CoA reductase 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TJJ9

    3. XM_005206902.5 → XP_005206959.1  fatty acyl-CoA reductase 2 isoform X1

      See identical proteins and their annotated locations for XP_005206959.1

      UniProtKB/Swiss-Prot
      Q0P5J1
      UniProtKB/TrEMBL
      A0AAA9TJJ9
      Conserved Domains (2) summary
      cd05236
      Location:11 → 330
      FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
      pfam03015
      Location:357 → 447
      Sterile; Male sterility protein

    4. XM_010805374.4 → XP_010803676.1  fatty acyl-CoA reductase 2 isoform X1

      See identical proteins and their annotated locations for XP_010803676.1

      UniProtKB/Swiss-Prot
      Q0P5J1
      UniProtKB/TrEMBL
      A0AAA9TJJ9
      Conserved Domains (2) summary
      cd05236
      Location:11 → 330
      FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
      pfam03015
      Location:357 → 447
      Sterile; Male sterility protein
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0P5J1.1 GenPept UniProtKB/Swiss-Prot:Q0P5J1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.