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    SLC35E3 solute carrier family 35 member E3 [ Bos taurus (domestic cattle) ]

    Gene ID: 509009, updated on 27-Dec-2024

    Summary

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    Official Symbol
    SLC35E3provided by VGNC
    Official Full Name
    solute carrier family 35 member E3provided by VGNC
    Primary source
    VGNC:VGNC:34831
    See related
    BGD:BT30423; Ensembl:ENSBTAG00000031919
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SLC35E3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (45047973..45065163, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase M Neighboring gene MDM2 proto-oncogene Neighboring gene uncharacterized LOC104972426 Neighboring gene small nucleolar RNA SNORA38 Neighboring gene nucleoporin 107 Neighboring gene RAP1B, member of RAS oncogene family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC151827

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleotide-sugar transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 35 member E3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083654.1 → NP_001077123.1  solute carrier family 35 member E3

      Status: PROVISIONAL

      Source sequence(s)
      BC134617
      UniProtKB/Swiss-Prot
      A4IFK2
      UniProtKB/TrEMBL
      A0AAA9T2R0
      Related
      ENSBTAP00000042665.2, ENSBTAT00000045262.3
      Conserved Domains (1) summary
      cl26744
      Location:13 → 294
      TPT; Triose-phosphate Transporter family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      45047973..45065163 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015471040.3 → XP_015326526.1  solute carrier family 35 member E3 isoform X1

      Conserved Domains (1) summary
      pfam03151
      Location:145 → 257
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A4IFK2.1 GenPept UniProtKB/Swiss-Prot:A4IFK2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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    Research Materials