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    LARP7 La ribonucleoprotein 7, transcriptional regulator [ Bos taurus (domestic cattle) ]

    Gene ID: 505053, updated on 1-Jan-2025

    Summary

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    Official Symbol
    LARP7provided by VGNC
    Official Full Name
    La ribonucleoprotein 7, transcriptional regulatorprovided by VGNC
    Primary source
    VGNC:VGNC:30794
    See related
    BGD:BT16760; Ensembl:ENSBTAG00000009632
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See LARP7 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (12971028..12988953, complement)

    Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene ankyrin 2 Neighboring gene uncharacterized LOC112447035 Neighboring gene microRNA mir-302b Neighboring gene microRNA mir-302c Neighboring gene microRNA mir-302a Neighboring gene microRNA mir-302d Neighboring gene microRNA mir-367 Neighboring gene zinc finger GRF-type containing 1 Neighboring gene neurogenin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC151878

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    la-related protein 7
    Names
    La ribonucleoprotein domain family member 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075184.2 → NP_001068652.2  la-related protein 7

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000006
      UniProtKB/TrEMBL
      F1MR14
      Related
      ENSBTAP00000012693.6, ENSBTAT00000012693.7
      Conserved Domains (3) summary
      cd08032
      Location:28 → 109
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:124 → 203
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      pfam08777
      Location:455 → 542
      RRM_3; RNA binding motif

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      12971028..12988953 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024993097.2 → XP_024848865.1  la-related protein 7 isoform X4

      Conserved Domains (3) summary
      cd08032
      Location:28 → 109
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:124 → 203
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:448 → 529
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    2. XM_005207598.5 → XP_005207655.1  la-related protein 7 isoform X3

      Conserved Domains (3) summary
      cd08032
      Location:28 → 109
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:124 → 203
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:449 → 530
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    3. XM_010805888.3 → XP_010804190.1  la-related protein 7 isoform X2

      See identical proteins and their annotated locations for XP_010804190.1

      Conserved Domains (3) summary
      cd08032
      Location:28 → 109
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:124 → 203
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:449 → 530
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    4. XM_010805887.4 → XP_010804189.1  la-related protein 7 isoform X1

      See identical proteins and their annotated locations for XP_010804189.1

      UniProtKB/TrEMBL
      A0A3Q1LP50
      Conserved Domains (3) summary
      cd08032
      Location:28 → 109
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:124 → 203
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:450 → 531
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    5. XM_015471493.3 → XP_015326979.1  la-related protein 7 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LP50
      Conserved Domains (3) summary
      cd08032
      Location:28 → 109
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:124 → 203
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:450 → 531
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    6. XM_005207596.5 → XP_005207653.1  la-related protein 7 isoform X1

      See identical proteins and their annotated locations for XP_005207653.1

      UniProtKB/TrEMBL
      A0A3Q1LP50
      Related
      ENSBTAP00000061840.2, ENSBTAT00000084701.2
      Conserved Domains (3) summary
      cd08032
      Location:28 → 109
      LARP_7; La RNA-binding domain of La-related protein 7
      cd12290
      Location:124 → 203
      RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
      cd12542
      Location:450 → 531
      RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

    7. XM_059887413.1 → XP_059743396.1  la-related protein 7 isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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