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    TMEM100 transmembrane protein 100 [ Bos taurus (domestic cattle) ]

    Gene ID: 613987, updated on 1-Jan-2025

    Summary

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    Official Symbol
    TMEM100provided by VGNC
    Official Full Name
    transmembrane protein 100provided by VGNC
    Primary source
    VGNC:VGNC:35941
    See related
    BGD:BT29087; Ensembl:ENSBTAG00000009292
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TMEM100 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (6030315..6036290, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene growth hormone-inducible transmembrane protein-like Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene small nucleolar RNA Z195/SNORD33/SNORD32 family Neighboring gene NEDD8-conjugating enzyme UBE2F-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC137256

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cellular response to BMP stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046522.2 → NP_001039987.1  transmembrane protein 100

      See identical proteins and their annotated locations for NP_001039987.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112685
      UniProtKB/Swiss-Prot
      Q2KIC8
      Related
      ENSBTAP00000012241.3, ENSBTAT00000012241.5
      Conserved Domains (1) summary
      pfam16311
      Location:1 → 133
      TMEM100; Transmembrane protein 100

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      6030315..6036290 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005219866.5 → XP_005219923.1  transmembrane protein 100 isoform X1

      See identical proteins and their annotated locations for XP_005219923.1

      UniProtKB/Swiss-Prot
      Q2KIC8
      Related
      ENSBTAP00000095421.1, ENSBTAT00000128409.1
      Conserved Domains (1) summary
      pfam16311
      Location:1 → 133
      TMEM100; Transmembrane protein 100

    2. XM_024980402.2 → XP_024836170.1  transmembrane protein 100 isoform X1

      UniProtKB/Swiss-Prot
      Q2KIC8
      Conserved Domains (1) summary
      pfam16311
      Location:1 → 133
      TMEM100; Transmembrane protein 100

    3. XM_024980401.2 → XP_024836169.1  transmembrane protein 100 isoform X1

      UniProtKB/Swiss-Prot
      Q2KIC8
      Related
      ENSBTAP00000096865.1, ENSBTAT00000134440.1
      Conserved Domains (1) summary
      pfam16311
      Location:1 → 133
      TMEM100; Transmembrane protein 100
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2KIC8.1 GenPept UniProtKB/Swiss-Prot:Q2KIC8

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