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    ARHGAP1 Rho GTPase activating protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 512817, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ARHGAP1provided by VGNC
    Official Full Name
    Rho GTPase activating protein 1provided by VGNC
    Primary source
    VGNC:VGNC:26073
    See related
    BGD:BT26593; Ensembl:ENSBTAG00000016501
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ARHGAP1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (76622892..76642909, complement)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene harbinger transposase derived 1 Neighboring gene autophagy related 13 Neighboring gene zinc finger protein 408 Neighboring gene coagulation factor II, thrombin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of endocytic recycling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rho GTPase-activating protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193062.2 → NP_001179991.1  rho GTPase-activating protein 1

      See identical proteins and their annotated locations for NP_001179991.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000015
      UniProtKB/TrEMBL
      A0AAA9SMB1, F6RWK1
      Related
      ENSBTAP00000041467.3, ENSBTAT00000043933.4
      Conserved Domains (2) summary
      cd04404
      Location:239 → 431
      RhoGAP-p50rhoGAP; RhoGAP-p50rhoGAP: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p50RhoGAP-like proteins; p50RhoGAP, also known as RhoGAP-1, contains a C-terminal RhoGAP domain and an N-terminal Sec14 domain which binds phosphatidylinositol ...
      pfam13716
      Location:82 → 204
      CRAL_TRIO_2; Divergent CRAL/TRIO domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      76622892..76642909 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059874670.1 → XP_059730653.1  rho GTPase-activating protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SMB1, F6RWK1

    2. XM_059874671.1 → XP_059730654.1  rho GTPase-activating protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SMB1, F6RWK1

    3. XM_005216451.5 → XP_005216508.1  rho GTPase-activating protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005216508.1

      UniProtKB/TrEMBL
      A0AAA9SMB1, F6RWK1
      Conserved Domains (2) summary
      cd04404
      Location:239 → 431
      RhoGAP-p50rhoGAP; RhoGAP-p50rhoGAP: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p50RhoGAP-like proteins; p50RhoGAP, also known as RhoGAP-1, contains a C-terminal RhoGAP domain and an N-terminal Sec14 domain which binds phosphatidylinositol ...
      pfam13716
      Location:82 → 204
      CRAL_TRIO_2; Divergent CRAL/TRIO domain

    4. XM_015474888.3 → XP_015330374.1  rho GTPase-activating protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SMB1, F6RWK1
      Conserved Domains (2) summary
      cd04404
      Location:239 → 431
      RhoGAP-p50rhoGAP; RhoGAP-p50rhoGAP: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p50RhoGAP-like proteins; p50RhoGAP, also known as RhoGAP-1, contains a C-terminal RhoGAP domain and an N-terminal Sec14 domain which binds phosphatidylinositol ...
      pfam13716
      Location:82 → 204
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
    Nucleotide Protein Strain
    Heading Accession and Version

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