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    RPL35A ribosomal protein L35a [ Bos taurus (domestic cattle) ]

    Gene ID: 506768, updated on 27-Dec-2024

    Summary

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    Official Symbol
    RPL35Aprovided by VGNC
    Official Full Name
    ribosomal protein L35aprovided by VGNC
    Primary source
    VGNC:VGNC:53601
    See related
    BGD:BT16120; Ensembl:ENSBTAG00000014208
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RPL35A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (70176686..70180139, complement)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene leishmanolysin like peptidase Neighboring gene U6 spliceosomal RNA Neighboring gene IQ motif containing G Neighboring gene leucine rich repeats and calponin homology domain containing 3 Neighboring gene small nucleolar RNA U2-30 Neighboring gene small nucleolar RNA U2-19

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC137069

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal large subunit biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein eL33
    Names
    60S ribosomal protein L35a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025321.3 → NP_001020492.1  large ribosomal subunit protein eL33

      See identical proteins and their annotated locations for NP_001020492.1

      Status: PROVISIONAL

      Source sequence(s)
      BC111654
      UniProtKB/Swiss-Prot
      Q56JY1
      UniProtKB/TrEMBL
      E1BHM9
      Related
      ENSBTAP00000018888.3, ENSBTAT00000018888.5
      Conserved Domains (1) summary
      pfam01247
      Location:5 → 103
      Ribosomal_L35Ae; Ribosomal protein L35Ae

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      70176686..70180139 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892744.1 → XP_059748727.1  large ribosomal subunit protein eL33 isoform X1

      UniProtKB/Swiss-Prot
      Q56JY1
      UniProtKB/TrEMBL
      E1BHM9

    2. XM_025000177.2 → XP_024855945.1  large ribosomal subunit protein eL33 isoform X1

      UniProtKB/Swiss-Prot
      Q56JY1
      UniProtKB/TrEMBL
      E1BHM9
      Conserved Domains (1) summary
      pfam01247
      Location:5 → 103
      Ribosomal_L35Ae; Ribosomal protein L35Ae

    3. XM_005201389.3 → XP_005201446.1  large ribosomal subunit protein eL33 isoform X1

      See identical proteins and their annotated locations for XP_005201446.1

      UniProtKB/Swiss-Prot
      Q56JY1
      UniProtKB/TrEMBL
      E1BHM9
      Conserved Domains (1) summary
      pfam01247
      Location:5 → 103
      Ribosomal_L35Ae; Ribosomal protein L35Ae
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q56JY1.1 GenPept UniProtKB/Swiss-Prot:Q56JY1

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