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    TMEM177 transmembrane protein 177 [ Bos taurus (domestic cattle) ]

    Gene ID: 505501, updated on 1-Jan-2025

    Summary

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    Official Symbol
    TMEM177provided by VGNC
    Official Full Name
    transmembrane protein 177provided by VGNC
    Primary source
    VGNC:VGNC:36002
    See related
    BGD:BT29607; Ensembl:ENSBTAG00000009058
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TMEM177 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (71465165..71482235)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 221 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized LOC132343131 Neighboring gene protein tyrosine phosphatase non-receptor type 4 Neighboring gene tumor susceptibility gene 101 protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 177

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192060.1 → NP_001178989.1  transmembrane protein 177

      See identical proteins and their annotated locations for NP_001178989.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000002
      UniProtKB/TrEMBL
      E1BDP4
      Related
      ENSBTAP00000011932.3, ENSBTAT00000011932.5

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      71465165..71482235
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892196.1 → XP_059748179.1  transmembrane protein 177 isoform X1

      UniProtKB/TrEMBL
      E1BDP4

    2. XM_005202555.5 → XP_005202612.1  transmembrane protein 177 isoform X1

      See identical proteins and their annotated locations for XP_005202612.1

      UniProtKB/TrEMBL
      E1BDP4
    Nucleotide Protein Strain
    Heading Accession and Version

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