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    FXYD5 FXYD domain containing ion transport regulator 5 [ Bos taurus (domestic cattle) ]

    Gene ID: 505584, updated on 30-Jan-2025

    Summary

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    Official Symbol
    FXYD5provided by VGNC
    Official Full Name
    FXYD domain containing ion transport regulator 5provided by VGNC
    Primary source
    VGNC:VGNC:29158
    See related
    BGD:BT24278; EnsemblRapid:ENSBTAG00070014579
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See FXYD5 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (45878251..45890081)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat LGI family member 4 Neighboring gene FXYD domain containing ion transport regulator 1 Neighboring gene FXYD domain containing ion transport regulator 7 Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene uncharacterized LOC101906791

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sodium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of sodium ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    FXYD domain-containing ion transport regulator 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192063.2 → NP_001178992.1  FXYD domain-containing ion transport regulator 5 precursor

      See identical proteins and their annotated locations for NP_001178992.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000018
      UniProtKB/TrEMBL
      A0A3Q1MRT6
      Conserved Domains (2) summary
      pfam02038
      Location:125 → 162
      ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
      cl26247
      Location:9 → 122
      DNA_pol3_delta2; DNA polymerase III, delta subunit

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      45878251..45890081
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024978024.2 → XP_024833792.1  FXYD domain-containing ion transport regulator 5 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MRT6
      Conserved Domains (2) summary
      pfam02038
      Location:125 → 162
      ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
      cl26247
      Location:9 → 122
      DNA_pol3_delta2; DNA polymerase III, delta subunit

    2. XM_024978025.2 → XP_024833793.1  FXYD domain-containing ion transport regulator 5 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MRT6
      Conserved Domains (2) summary
      pfam02038
      Location:125 → 162
      ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
      cl26247
      Location:9 → 122
      DNA_pol3_delta2; DNA polymerase III, delta subunit

    3. XM_024978023.2 → XP_024833791.1  FXYD domain-containing ion transport regulator 5 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MRT6
      Related
      ENSBTAP00070019349.1, ENSBTAT00070032979.1
      Conserved Domains (2) summary
      pfam02038
      Location:125 → 162
      ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
      cl26247
      Location:9 → 122
      DNA_pol3_delta2; DNA polymerase III, delta subunit

    4. XM_010814743.4 → XP_010813045.1  FXYD domain-containing ion transport regulator 5 isoform X1

      See identical proteins and their annotated locations for XP_010813045.1

      UniProtKB/TrEMBL
      A0A3Q1MRT6
      Conserved Domains (2) summary
      pfam02038
      Location:125 → 162
      ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
      cl26247
      Location:9 → 122
      DNA_pol3_delta2; DNA polymerase III, delta subunit

    5. XM_015475857.3 → XP_015331343.1  FXYD domain-containing ion transport regulator 5 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MRT6
      Conserved Domains (2) summary
      pfam02038
      Location:125 → 162
      ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
      cl26247
      Location:9 → 122
      DNA_pol3_delta2; DNA polymerase III, delta subunit

    6. XM_005218917.4 → XP_005218974.1  FXYD domain-containing ion transport regulator 5 isoform X1

      See identical proteins and their annotated locations for XP_005218974.1

      UniProtKB/TrEMBL
      A0A3Q1MRT6
      Conserved Domains (2) summary
      pfam02038
      Location:125 → 162
      ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
      cl26247
      Location:9 → 122
      DNA_pol3_delta2; DNA polymerase III, delta subunit

    7. XM_005218919.3 → XP_005218976.1  FXYD domain-containing ion transport regulator 5 isoform X4

      See identical proteins and their annotated locations for XP_005218976.1

      Conserved Domains (2) summary
      pfam02038
      Location:115 → 152
      ATP1G1_PLM_MAT8; ATP1G1/PLM/MAT8 family
      cl26247
      Location:9 → 112
      DNA_pol3_delta2; DNA polymerase III, delta subunit

    8. XM_059876550.1 → XP_059732533.1  FXYD domain-containing ion transport regulator 5 isoform X3

    9. XM_059876549.1 → XP_059732532.1  FXYD domain-containing ion transport regulator 5 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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