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    JPH1 junctophilin 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 536811, updated on 27-Dec-2024

    Summary

    Official Symbol
    JPH1provided by VGNC
    Official Full Name
    junctophilin 1provided by VGNC
    Primary source
    VGNC:VGNC:30380
    See related
    BGD:BT13157; Ensembl:ENSBTAG00000008842
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See JPH1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (37502881..37595465, complement)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112449517 Neighboring gene acyl-CoA 6-desaturase-like Neighboring gene chromobox protein homolog 1-like Neighboring gene ganglioside induced differentiation associated protein 1 Neighboring gene peptidase inhibitor 15

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192887.3NP_001179816.1  junctophilin-1

      See identical proteins and their annotated locations for NP_001179816.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000014
      UniProtKB/TrEMBL
      A0A3Q1LYZ5, G5E5B8
      Related
      ENSBTAP00000011643.4, ENSBTAT00000011643.6
      Conserved Domains (1) summary
      pfam02493
      Location:304326
      MORN; MORN repeat

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37502881..37595465 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005215520.3XP_005215577.1  junctophilin-1 isoform X1

      See identical proteins and their annotated locations for XP_005215577.1

      UniProtKB/TrEMBL
      A0A3Q1LYZ5, G5E5B8
      Conserved Domains (1) summary
      pfam02493
      Location:304326
      MORN; MORN repeat
    2. XM_005215521.3XP_005215578.1  junctophilin-1 isoform X1

      See identical proteins and their annotated locations for XP_005215578.1

      UniProtKB/TrEMBL
      A0A3Q1LYZ5, G5E5B8
      Conserved Domains (1) summary
      pfam02493
      Location:304326
      MORN; MORN repeat
    3. XM_005215519.3XP_005215576.1  junctophilin-1 isoform X1

      See identical proteins and their annotated locations for XP_005215576.1

      UniProtKB/TrEMBL
      A0A3Q1LYZ5, G5E5B8
      Conserved Domains (1) summary
      pfam02493
      Location:304326
      MORN; MORN repeat
    4. XM_010812068.4XP_010810370.1  junctophilin-1 isoform X2

      Conserved Domains (1) summary
      pfam02493
      Location:304326
      MORN; MORN repeat

    RNA

    1. XR_009497079.1 RNA Sequence

    2. XR_811164.3 RNA Sequence