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    SCAMP5 secretory carrier membrane protein 5 [ Bos taurus (domestic cattle) ]

    Gene ID: 508510, updated on 27-Dec-2024

    Summary

    Official Symbol
    SCAMP5provided by VGNC
    Official Full Name
    secretory carrier membrane protein 5provided by VGNC
    Primary source
    VGNC:VGNC:34319
    See related
    BGD:BT23638; Ensembl:ENSBTAG00000061424
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See SCAMP5 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 21 NC_037348.1 (33697299..33718476, complement)

    Chromosome 21 - NC_037348.1Genomic Context describing neighboring genes Neighboring gene 14-3-3 protein epsilon-like Neighboring gene phosphopantothenoylcysteine decarboxylase Neighboring gene ribonuclease P and MRP subunit p25 Neighboring gene cytochrome c oxidase subunit 5A

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037348.1 Chromosome 21 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General protein information

    Preferred Names
    secretory carrier-associated membrane protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001166565.1NP_001160037.1  secretory carrier-associated membrane protein 5

      See identical proteins and their annotated locations for NP_001160037.1

      Status: VALIDATED

      Source sequence(s)
      NKLS02000021
      UniProtKB/Swiss-Prot
      Q17QF8
      UniProtKB/TrEMBL
      A0AAA9S1Y1
      Related
      ENSBTAP00000081313.1, ENSBTAT00000135093.1
      Conserved Domains (1) summary
      pfam04144
      Location:6179
      SCAMP; SCAMP family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037348.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      33697299..33718476 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059878986.1XP_059734969.1  secretory carrier-associated membrane protein 5 isoform X1

      UniProtKB/Swiss-Prot
      Q17QF8
      UniProtKB/TrEMBL
      A0AAA9S1Y1
      Related
      ENSBTAP00000076606.1, ENSBTAT00000133893.1