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    CG42232 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 7354465, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CG42232provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0250754
    Locus tag
    Dmel_CG42232
    See related
    AllianceGenome:FB:FBgn0250754
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Liang-1.14; CG14896; CG14897; clone 1.14; Dmel\CG42232
    Old locus tag
    Dmel_CG14896; Dmel_CG14897
    Summary
    Is expressed in several structures, including anterior endoderm; anterior endoderm anlage; ganglia; germline cell; and neuroblasts. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG42232 in Genome Data Viewer
    Location:
    89B17-89B17; 3-58 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (16458280..16469663, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12284002..12295385, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR46029 Neighboring gene COP9 signalosome subunit 5 Neighboring gene Guanylyl cyclase at 89Da

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The asymmetrically segregating lncRNA cherub is required for transforming stem cells into malignant cells. Landskron L, et al. Elife, 2018 Mar 27. PMID 29580384, Free PMC Article
    2. Hrp59, an hnRNP M protein in Chironomus and Drosophila, binds to exonic splicing enhancers and is required for expression of a subset of mRNAs. Kiesler E, et al. J Cell Biol, 2005 Mar 28. PMID 15781475, Free PMC Article
    3. An RNAi screen to identify proteins required for cohesion rejuvenation during meiotic prophase in Drosophila oocytes. Haseeb MA, et al. G3 (Bethesda), 2024 Aug 7. PMID 38849129, Free PMC Article
    4. Proximity labeling reveals novel interactomes in live Drosophila tissue. Mannix KM, et al. Development, 2019 Jul 18. PMID 31208963, Free PMC Article
    5. Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function. Lécuyer E, et al. Cell, 2007 Oct 5. PMID 17923096

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42232-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      16458280..16469663 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001144588.2 → NP_001138060.1  uncharacterized protein Dmel_CG42232 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138060.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0I8
      Conserved Domains (4) summary
      PTZ00121
      Location:2402 → 2976
      PTZ00121; MAEBL; Provisional
      PHA03247
      Location:2935 → 3317
      PHA03247; large tegument protein UL36; Provisional
      PRK12678
      Location:3307 → 3440
      PRK12678; transcription termination factor Rho; Provisional
      pfam08580
      Location:335 → 537
      KAR9; Yeast cortical protein KAR9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7Z0I8 B7Z0I8
    Q5BIH2 Q5BIH2
    Q8SXM6 Q8SXM6

    Gene LinkOut

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