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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_145535.2 → NP_663510.1 syntenin-2
See identical proteins and their annotated locations for NP_663510.1
Status: VALIDATED
- Source sequence(s)
-
AI448770, AK144452, AL928719
- Consensus CDS
-
CCDS16870.1
- UniProtKB/Swiss-Prot
- Q3UN51, Q99JZ0
- Related
- ENSMUSP00000028950.9, ENSMUST00000028950.9
- Conserved Domains (2) summary
-
- cd00136
Location:117 → 185
- PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
- cd00992
Location:191 → 264
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
151414203..151431925
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006499304.4 → XP_006499367.1 syntenin-2 isoform X1
See identical proteins and their annotated locations for XP_006499367.1
- UniProtKB/Swiss-Prot
- Q3UN51, Q99JZ0
- Conserved Domains (2) summary
-
- cd00136
Location:117 → 185
- PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
- cd00992
Location:191 → 264
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_006499305.3 → XP_006499368.1 syntenin-2 isoform X1
See identical proteins and their annotated locations for XP_006499368.1
- UniProtKB/Swiss-Prot
- Q3UN51, Q99JZ0
- Conserved Domains (2) summary
-
- cd00136
Location:117 → 185
- PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
- cd00992
Location:191 → 264
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_036161440.1 → XP_036017333.1 syntenin-2 isoform X1
- UniProtKB/Swiss-Prot
- Q3UN51, Q99JZ0
- Conserved Domains (2) summary
-
- cd00136
Location:117 → 185
- PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
- cd00992
Location:191 → 264
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...